Gene : AT1G45010 A. thaliana TAIR10
Defline:  (1 of 5) KOG4474 - Uncharacterized conserved protein Genomic Order:  3696
Name:  ? AT1G45010 Secondary Identifier:  ? PAC:19655128
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G45010 0.5kb upstream 0.5kb upstream 2598 true Chr1: 17013400-17015997 Arabidopsis thaliana
AT1G45010 0.5kb upstream 0.5kb upstream 500 false Chr1: 17015498-17015997 Arabidopsis thaliana
AT1G45010 0.5kb downstream 0.5kb downstream 2598 true Chr1: 17012900-17015497 Arabidopsis thaliana
AT1G45010 0.5kb downstream 0.5kb downstream 500 false Chr1: 17012900-17013399 Arabidopsis thaliana
AT1G45010 1.0kb upstream 1.0kb upstream 3098 true Chr1: 17013400-17016497 Arabidopsis thaliana
AT1G45010 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17015498-17016497 Arabidopsis thaliana
AT1G45010 1.0kb downstream 1.0kb downstream 3098 true Chr1: 17012400-17015497 Arabidopsis thaliana
AT1G45010 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17012400-17013399 Arabidopsis thaliana
AT1G45010 2.0kb upstream 2.0kb upstream 4098 true Chr1: 17013400-17017497 Arabidopsis thaliana
AT1G45010 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17015498-17017497 Arabidopsis thaliana
AT1G45010 2.0kb downstream 2.0kb downstream 4098 true Chr1: 17011400-17015497 Arabidopsis thaliana
AT1G45010 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17011400-17013399 Arabidopsis thaliana
AT1G45010 5.0kb upstream 5.0kb upstream 7098 true Chr1: 17013400-17020497 Arabidopsis thaliana
AT1G45010 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17015498-17020497 Arabidopsis thaliana
AT1G45010 5.0kb downstream 5.0kb downstream 7098 true Chr1: 17008400-17015497 Arabidopsis thaliana
AT1G45010 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17008400-17013399 Arabidopsis thaliana
AT1G45010 10.0kb upstream 10.0kb upstream 12098 true Chr1: 17013400-17025497 Arabidopsis thaliana
AT1G45010 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17015498-17025497 Arabidopsis thaliana
AT1G45010 10.0kb downstream 10.0kb downstream 12098 true Chr1: 17003400-17015497 Arabidopsis thaliana
AT1G45010 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17003400-17013399 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364519 5261 Brassicaceae View MSA
123838054 5264 Brassicales-Malvales View MSA
124337690 5266 SBM View MSA
124240266 5268 Malvidae View MSA
124061810 5270 Rosid View MSA
123740505 5271 Pentapetalae View MSA
122793089 5272 Eudicot View MSA
122047305 5273 Angiosperm View MSA
121344019 5274 Embryophyte View MSA
123425405 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.511       High
cufflinks 0.137     Low  
cufflinks 5.188        
cufflinks 0.269     Low  
cufflinks 4.103        
cufflinks 0.097     Low Low

0 Strain