Gene : AAP5 A. thaliana TAIR10
Primary Identifier:  ? AT1G44100 Defline:  (1 of 2) PTHR22950//PTHR22950:SF205 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 3-RELATED
Genomic Order:  3656 Name:  ? AT1G44100
Secondary Identifier:  ? PAC:19656629
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G44100 0.5kb upstream 0.5kb upstream 3781 true Chr1: 16764405-16768185 Arabidopsis thaliana
AT1G44100 0.5kb upstream 0.5kb upstream 500 false Chr1: 16767686-16768185 Arabidopsis thaliana
AT1G44100 0.5kb downstream 0.5kb downstream 3781 true Chr1: 16763905-16767685 Arabidopsis thaliana
AT1G44100 0.5kb downstream 0.5kb downstream 500 false Chr1: 16763905-16764404 Arabidopsis thaliana
AT1G44100 1.0kb upstream 1.0kb upstream 4281 true Chr1: 16764405-16768685 Arabidopsis thaliana
AT1G44100 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16767686-16768685 Arabidopsis thaliana
AT1G44100 1.0kb downstream 1.0kb downstream 4281 true Chr1: 16763405-16767685 Arabidopsis thaliana
AT1G44100 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16763405-16764404 Arabidopsis thaliana
AT1G44100 2.0kb upstream 2.0kb upstream 5281 true Chr1: 16764405-16769685 Arabidopsis thaliana
AT1G44100 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16767686-16769685 Arabidopsis thaliana
AT1G44100 2.0kb downstream 2.0kb downstream 5281 true Chr1: 16762405-16767685 Arabidopsis thaliana
AT1G44100 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16762405-16764404 Arabidopsis thaliana
AT1G44100 5.0kb upstream 5.0kb upstream 8281 true Chr1: 16764405-16772685 Arabidopsis thaliana
AT1G44100 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16767686-16772685 Arabidopsis thaliana
AT1G44100 5.0kb downstream 5.0kb downstream 8281 true Chr1: 16759405-16767685 Arabidopsis thaliana
AT1G44100 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16759405-16764404 Arabidopsis thaliana
AT1G44100 10.0kb upstream 10.0kb upstream 13281 true Chr1: 16764405-16777685 Arabidopsis thaliana
AT1G44100 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16767686-16777685 Arabidopsis thaliana
AT1G44100 10.0kb downstream 10.0kb downstream 13281 true Chr1: 16754405-16767685 Arabidopsis thaliana
AT1G44100 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16754405-16764404 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510884 5273 Angiosperm View MSA
122369403 5261 Brassicaceae View MSA
123799772 5264 Brassicales-Malvales View MSA
124297260 5266 SBM View MSA
124149198 5268 Malvidae View MSA
123875051 5270 Rosid View MSA
123458934 5271 Pentapetalae View MSA
122494331 5272 Eudicot View MSA
121351118 5274 Embryophyte View MSA
123426213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.104       High
cufflinks 3.765       Low
cufflinks 7.397        
cufflinks 6.594        
cufflinks 7.802        
cufflinks 7.816        

0 Strain