Gene : AT1G43800 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31155//PTHR31155:SF3 - ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED // ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE 6, CHLOROPLASTIC Genomic Order:  3637
Name:  ? AT1G43800 Secondary Identifier:  ? PAC:19652547
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5147 Arabidopsis thaliana pathologic  
Athaliana PWY-5156 Arabidopsis thaliana pathologic  
Athaliana PWY-5366 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G43800 0.5kb upstream 0.5kb upstream 2613 true Chr1: 16577110-16579722 Arabidopsis thaliana
AT1G43800 0.5kb upstream 0.5kb upstream 500 false Chr1: 16577110-16577609 Arabidopsis thaliana
AT1G43800 0.5kb downstream 0.5kb downstream 2613 true Chr1: 16577610-16580222 Arabidopsis thaliana
AT1G43800 0.5kb downstream 0.5kb downstream 500 false Chr1: 16579723-16580222 Arabidopsis thaliana
AT1G43800 1.0kb upstream 1.0kb upstream 3113 true Chr1: 16576610-16579722 Arabidopsis thaliana
AT1G43800 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16576610-16577609 Arabidopsis thaliana
AT1G43800 1.0kb downstream 1.0kb downstream 3113 true Chr1: 16577610-16580722 Arabidopsis thaliana
AT1G43800 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16579723-16580722 Arabidopsis thaliana
AT1G43800 2.0kb upstream 2.0kb upstream 4113 true Chr1: 16575610-16579722 Arabidopsis thaliana
AT1G43800 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16575610-16577609 Arabidopsis thaliana
AT1G43800 2.0kb downstream 2.0kb downstream 4113 true Chr1: 16577610-16581722 Arabidopsis thaliana
AT1G43800 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16579723-16581722 Arabidopsis thaliana
AT1G43800 5.0kb upstream 5.0kb upstream 7113 true Chr1: 16572610-16579722 Arabidopsis thaliana
AT1G43800 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16572610-16577609 Arabidopsis thaliana
AT1G43800 5.0kb downstream 5.0kb downstream 7113 true Chr1: 16577610-16584722 Arabidopsis thaliana
AT1G43800 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16579723-16584722 Arabidopsis thaliana
AT1G43800 10.0kb upstream 10.0kb upstream 12113 true Chr1: 16567610-16579722 Arabidopsis thaliana
AT1G43800 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16567610-16577609 Arabidopsis thaliana
AT1G43800 10.0kb downstream 10.0kb downstream 12113 true Chr1: 16577610-16589722 Arabidopsis thaliana
AT1G43800 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16579723-16589722 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026445 5273 Angiosperm View MSA
122343462 5261 Brassicaceae View MSA
123828541 5264 Brassicales-Malvales View MSA
124337007 5266 SBM View MSA
124237804 5268 Malvidae View MSA
124066953 5270 Rosid View MSA
123741876 5271 Pentapetalae View MSA
122770152 5272 Eudicot View MSA
121296333 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.69        
cufflinks 3.099        
cufflinks 0.228     Low  
cufflinks 2.48        
cufflinks 0.088     Low Low
cufflinks 6.531       High

0 Strain