Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G42560 0.5kb upstream | 0.5kb | upstream | 3694 | true | Chr1: 15980135-15983828 | Arabidopsis thaliana |
AT1G42560 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 15983329-15983828 | Arabidopsis thaliana |
AT1G42560 0.5kb downstream | 0.5kb | downstream | 3694 | true | Chr1: 15979635-15983328 | Arabidopsis thaliana |
AT1G42560 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 15979635-15980134 | Arabidopsis thaliana |
AT1G42560 1.0kb upstream | 1.0kb | upstream | 4194 | true | Chr1: 15980135-15984328 | Arabidopsis thaliana |
AT1G42560 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 15983329-15984328 | Arabidopsis thaliana |
AT1G42560 1.0kb downstream | 1.0kb | downstream | 4194 | true | Chr1: 15979135-15983328 | Arabidopsis thaliana |
AT1G42560 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 15979135-15980134 | Arabidopsis thaliana |
AT1G42560 2.0kb upstream | 2.0kb | upstream | 5194 | true | Chr1: 15980135-15985328 | Arabidopsis thaliana |
AT1G42560 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 15983329-15985328 | Arabidopsis thaliana |
AT1G42560 2.0kb downstream | 2.0kb | downstream | 5194 | true | Chr1: 15978135-15983328 | Arabidopsis thaliana |
AT1G42560 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 15978135-15980134 | Arabidopsis thaliana |
AT1G42560 5.0kb upstream | 5.0kb | upstream | 8194 | true | Chr1: 15980135-15988328 | Arabidopsis thaliana |
AT1G42560 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 15983329-15988328 | Arabidopsis thaliana |
AT1G42560 5.0kb downstream | 5.0kb | downstream | 8194 | true | Chr1: 15975135-15983328 | Arabidopsis thaliana |
AT1G42560 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 15975135-15980134 | Arabidopsis thaliana |
AT1G42560 10.0kb upstream | 10.0kb | upstream | 13194 | true | Chr1: 15980135-15993328 | Arabidopsis thaliana |
AT1G42560 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 15983329-15993328 | Arabidopsis thaliana |
AT1G42560 10.0kb downstream | 10.0kb | downstream | 13194 | true | Chr1: 15970135-15983328 | Arabidopsis thaliana |
AT1G42560 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 15970135-15980134 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122343090 | 5261 | Brassicaceae | View MSA |
123837039 | 5264 | Brassicales-Malvales | View MSA |
124337065 | 5266 | SBM | View MSA |
124238510 | 5268 | Malvidae | View MSA |
124066095 | 5270 | Rosid | View MSA |
123747976 | 5271 | Pentapetalae | View MSA |
122787407 | 5272 | Eudicot | View MSA |
122047859 | 5273 | Angiosperm | View MSA |
121350481 | 5274 | Embryophyte | View MSA |
123428182 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.004 | Low | |||
cufflinks | 0.005 | Low | |||
cufflinks | 0.048 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.064 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |