Gene : AT1G36390 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21237//PTHR21237:SF4 - GRPE PROTEIN // GRPE PROTEIN HOMOLOG Genomic Order:  3530
Name:  ? AT1G36390 Secondary Identifier:  ? PAC:19654214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G36390 0.5kb upstream 0.5kb upstream 2672 true Chr1: 13701401-13704072 Arabidopsis thaliana
AT1G36390 0.5kb upstream 0.5kb upstream 500 false Chr1: 13703573-13704072 Arabidopsis thaliana
AT1G36390 0.5kb downstream 0.5kb downstream 2672 true Chr1: 13700901-13703572 Arabidopsis thaliana
AT1G36390 0.5kb downstream 0.5kb downstream 500 false Chr1: 13700901-13701400 Arabidopsis thaliana
AT1G36390 1.0kb upstream 1.0kb upstream 3172 true Chr1: 13701401-13704572 Arabidopsis thaliana
AT1G36390 1.0kb upstream 1.0kb upstream 1000 false Chr1: 13703573-13704572 Arabidopsis thaliana
AT1G36390 1.0kb downstream 1.0kb downstream 3172 true Chr1: 13700401-13703572 Arabidopsis thaliana
AT1G36390 1.0kb downstream 1.0kb downstream 1000 false Chr1: 13700401-13701400 Arabidopsis thaliana
AT1G36390 2.0kb upstream 2.0kb upstream 4172 true Chr1: 13701401-13705572 Arabidopsis thaliana
AT1G36390 2.0kb upstream 2.0kb upstream 2000 false Chr1: 13703573-13705572 Arabidopsis thaliana
AT1G36390 2.0kb downstream 2.0kb downstream 4172 true Chr1: 13699401-13703572 Arabidopsis thaliana
AT1G36390 2.0kb downstream 2.0kb downstream 2000 false Chr1: 13699401-13701400 Arabidopsis thaliana
AT1G36390 5.0kb upstream 5.0kb upstream 7172 true Chr1: 13701401-13708572 Arabidopsis thaliana
AT1G36390 5.0kb upstream 5.0kb upstream 5000 false Chr1: 13703573-13708572 Arabidopsis thaliana
AT1G36390 5.0kb downstream 5.0kb downstream 7172 true Chr1: 13696401-13703572 Arabidopsis thaliana
AT1G36390 5.0kb downstream 5.0kb downstream 5000 false Chr1: 13696401-13701400 Arabidopsis thaliana
AT1G36390 10.0kb upstream 10.0kb upstream 12172 true Chr1: 13701401-13713572 Arabidopsis thaliana
AT1G36390 10.0kb upstream 10.0kb upstream 10000 false Chr1: 13703573-13713572 Arabidopsis thaliana
AT1G36390 10.0kb downstream 10.0kb downstream 12172 true Chr1: 13691401-13703572 Arabidopsis thaliana
AT1G36390 10.0kb downstream 10.0kb downstream 10000 false Chr1: 13691401-13701400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370761 5261 Brassicaceae View MSA
123834756 5264 Brassicales-Malvales View MSA
124343188 5266 SBM View MSA
124247920 5268 Malvidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.174       High
cufflinks 2.765        
cufflinks 10.106       High
cufflinks 2.428        
cufflinks 6.529        
cufflinks 2.583        

0 Strain