Gene : PHI-1 A. thaliana TAIR10
Primary Identifier:  ? AT1G35140 Defline:  (1 of 2) PTHR31279//PTHR31279:SF3 - FAMILY NOT NAMED // (PHI-1) PROTEIN, PUTATIVE-RELATED
Genomic Order:  3440 Name:  ? AT1G35140
Secondary Identifier:  ? PAC:19650735
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G35140 0.5kb upstream 0.5kb upstream 1632 true Chr1: 12851497-12853128 Arabidopsis thaliana
AT1G35140 0.5kb upstream 0.5kb upstream 500 false Chr1: 12851497-12851996 Arabidopsis thaliana
AT1G35140 0.5kb downstream 0.5kb downstream 1632 true Chr1: 12851997-12853628 Arabidopsis thaliana
AT1G35140 0.5kb downstream 0.5kb downstream 500 false Chr1: 12853129-12853628 Arabidopsis thaliana
AT1G35140 1.0kb upstream 1.0kb upstream 2132 true Chr1: 12850997-12853128 Arabidopsis thaliana
AT1G35140 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12850997-12851996 Arabidopsis thaliana
AT1G35140 1.0kb downstream 1.0kb downstream 2132 true Chr1: 12851997-12854128 Arabidopsis thaliana
AT1G35140 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12853129-12854128 Arabidopsis thaliana
AT1G35140 2.0kb upstream 2.0kb upstream 3132 true Chr1: 12849997-12853128 Arabidopsis thaliana
AT1G35140 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12849997-12851996 Arabidopsis thaliana
AT1G35140 2.0kb downstream 2.0kb downstream 3132 true Chr1: 12851997-12855128 Arabidopsis thaliana
AT1G35140 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12853129-12855128 Arabidopsis thaliana
AT1G35140 5.0kb upstream 5.0kb upstream 6132 true Chr1: 12846997-12853128 Arabidopsis thaliana
AT1G35140 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12846997-12851996 Arabidopsis thaliana
AT1G35140 5.0kb downstream 5.0kb downstream 6132 true Chr1: 12851997-12858128 Arabidopsis thaliana
AT1G35140 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12853129-12858128 Arabidopsis thaliana
AT1G35140 10.0kb upstream 10.0kb upstream 11132 true Chr1: 12841997-12853128 Arabidopsis thaliana
AT1G35140 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12841997-12851996 Arabidopsis thaliana
AT1G35140 10.0kb downstream 10.0kb downstream 11132 true Chr1: 12851997-12863128 Arabidopsis thaliana
AT1G35140 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12853129-12863128 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376556 5261 Brassicaceae View MSA
123801289 5264 Brassicales-Malvales View MSA
124298611 5266 SBM View MSA
124252276 5268 Malvidae View MSA
124074854 5270 Rosid View MSA
123747459 5271 Pentapetalae View MSA
122794383 5272 Eudicot View MSA
122046837 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.5     High Low
cufflinks 204.113     High High
cufflinks 89.905     High  
cufflinks 113.489     High  
cufflinks 36.444     High Low
cufflinks 222.552     High High

0 Strain