Gene : AT1G34570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR18829:SF0 - YAE1 DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  3411
Name:  ? AT1G34570 Secondary Identifier:  ? PAC:19656287
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G34570 0.5kb upstream 0.5kb upstream 2047 true Chr1: 12654940-12656986 Arabidopsis thaliana
AT1G34570 0.5kb upstream 0.5kb upstream 500 false Chr1: 12656487-12656986 Arabidopsis thaliana
AT1G34570 0.5kb downstream 0.5kb downstream 2047 true Chr1: 12654440-12656486 Arabidopsis thaliana
AT1G34570 0.5kb downstream 0.5kb downstream 500 false Chr1: 12654440-12654939 Arabidopsis thaliana
AT1G34570 1.0kb upstream 1.0kb upstream 2547 true Chr1: 12654940-12657486 Arabidopsis thaliana
AT1G34570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12656487-12657486 Arabidopsis thaliana
AT1G34570 1.0kb downstream 1.0kb downstream 2547 true Chr1: 12653940-12656486 Arabidopsis thaliana
AT1G34570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12653940-12654939 Arabidopsis thaliana
AT1G34570 2.0kb upstream 2.0kb upstream 3547 true Chr1: 12654940-12658486 Arabidopsis thaliana
AT1G34570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12656487-12658486 Arabidopsis thaliana
AT1G34570 2.0kb downstream 2.0kb downstream 3547 true Chr1: 12652940-12656486 Arabidopsis thaliana
AT1G34570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12652940-12654939 Arabidopsis thaliana
AT1G34570 5.0kb upstream 5.0kb upstream 6547 true Chr1: 12654940-12661486 Arabidopsis thaliana
AT1G34570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12656487-12661486 Arabidopsis thaliana
AT1G34570 5.0kb downstream 5.0kb downstream 6547 true Chr1: 12649940-12656486 Arabidopsis thaliana
AT1G34570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12649940-12654939 Arabidopsis thaliana
AT1G34570 10.0kb upstream 10.0kb upstream 11547 true Chr1: 12654940-12666486 Arabidopsis thaliana
AT1G34570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12656487-12666486 Arabidopsis thaliana
AT1G34570 10.0kb downstream 10.0kb downstream 11547 true Chr1: 12644940-12656486 Arabidopsis thaliana
AT1G34570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12644940-12654939 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361335 5261 Brassicaceae View MSA
123836361 5264 Brassicales-Malvales View MSA
124340364 5266 SBM View MSA
124250412 5268 Malvidae View MSA
124050165 5270 Rosid View MSA
123752339 5271 Pentapetalae View MSA
122789611 5272 Eudicot View MSA
122051590 5273 Angiosperm View MSA
121347249 5274 Embryophyte View MSA
123426251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.527       High
cufflinks 4.222        
cufflinks 9.217        
cufflinks 4.01        
cufflinks 7.58        
cufflinks 3.874        

0 Strain