Gene : STOP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G34370 Defline:  (1 of 5) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED
Genomic Order:  3392 Name:  ? AT1G34370
Secondary Identifier:  ? PAC:19655288
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G34370 0.5kb upstream 0.5kb upstream 2754 true Chr1: 12549946-12552699 Arabidopsis thaliana
AT1G34370 0.5kb upstream 0.5kb upstream 500 false Chr1: 12549946-12550445 Arabidopsis thaliana
AT1G34370 0.5kb downstream 0.5kb downstream 2754 true Chr1: 12550446-12553199 Arabidopsis thaliana
AT1G34370 0.5kb downstream 0.5kb downstream 500 false Chr1: 12552700-12553199 Arabidopsis thaliana
AT1G34370 1.0kb upstream 1.0kb upstream 3254 true Chr1: 12549446-12552699 Arabidopsis thaliana
AT1G34370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12549446-12550445 Arabidopsis thaliana
AT1G34370 1.0kb downstream 1.0kb downstream 3254 true Chr1: 12550446-12553699 Arabidopsis thaliana
AT1G34370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12552700-12553699 Arabidopsis thaliana
AT1G34370 2.0kb upstream 2.0kb upstream 4254 true Chr1: 12548446-12552699 Arabidopsis thaliana
AT1G34370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12548446-12550445 Arabidopsis thaliana
AT1G34370 2.0kb downstream 2.0kb downstream 4254 true Chr1: 12550446-12554699 Arabidopsis thaliana
AT1G34370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12552700-12554699 Arabidopsis thaliana
AT1G34370 5.0kb upstream 5.0kb upstream 7254 true Chr1: 12545446-12552699 Arabidopsis thaliana
AT1G34370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12545446-12550445 Arabidopsis thaliana
AT1G34370 5.0kb downstream 5.0kb downstream 7254 true Chr1: 12550446-12557699 Arabidopsis thaliana
AT1G34370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12552700-12557699 Arabidopsis thaliana
AT1G34370 10.0kb upstream 10.0kb upstream 12254 true Chr1: 12540446-12552699 Arabidopsis thaliana
AT1G34370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12540446-12550445 Arabidopsis thaliana
AT1G34370 10.0kb downstream 10.0kb downstream 12254 true Chr1: 12550446-12562699 Arabidopsis thaliana
AT1G34370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12552700-12562699 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365851 5261 Brassicaceae View MSA
123838084 5264 Brassicales-Malvales View MSA
124345044 5266 SBM View MSA
124243158 5268 Malvidae View MSA
124065989 5270 Rosid View MSA
123750703 5271 Pentapetalae View MSA
122786021 5272 Eudicot View MSA
122049146 5273 Angiosperm View MSA
121347779 5274 Embryophyte View MSA
123380625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.878        
cufflinks 10.342        
cufflinks 5.661       Low
cufflinks 13.622       High
cufflinks 6.384        
cufflinks 11.378        

0 Strain