Gene : AGL104 A. thaliana TAIR10
Primary Identifier:  ? AT1G22130 Defline:  (1 of 3) PTHR11945//PTHR11945:SF154 - MADS BOX PROTEIN // F2E2.20-RELATED
Genomic Order:  2240 Name:  ? AT1G22130
Secondary Identifier:  ? PAC:19651829
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22130 0.5kb upstream 0.5kb upstream 2378 true Chr1: 7812387-7814764 Arabidopsis thaliana
AT1G22130 0.5kb upstream 0.5kb upstream 500 false Chr1: 7814265-7814764 Arabidopsis thaliana
AT1G22130 0.5kb downstream 0.5kb downstream 2378 true Chr1: 7811887-7814264 Arabidopsis thaliana
AT1G22130 0.5kb downstream 0.5kb downstream 500 false Chr1: 7811887-7812386 Arabidopsis thaliana
AT1G22130 1.0kb upstream 1.0kb upstream 2878 true Chr1: 7812387-7815264 Arabidopsis thaliana
AT1G22130 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7814265-7815264 Arabidopsis thaliana
AT1G22130 1.0kb downstream 1.0kb downstream 2878 true Chr1: 7811387-7814264 Arabidopsis thaliana
AT1G22130 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7811387-7812386 Arabidopsis thaliana
AT1G22130 2.0kb upstream 2.0kb upstream 3878 true Chr1: 7812387-7816264 Arabidopsis thaliana
AT1G22130 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7814265-7816264 Arabidopsis thaliana
AT1G22130 2.0kb downstream 2.0kb downstream 3878 true Chr1: 7810387-7814264 Arabidopsis thaliana
AT1G22130 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7810387-7812386 Arabidopsis thaliana
AT1G22130 5.0kb upstream 5.0kb upstream 6878 true Chr1: 7812387-7819264 Arabidopsis thaliana
AT1G22130 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7814265-7819264 Arabidopsis thaliana
AT1G22130 5.0kb downstream 5.0kb downstream 6878 true Chr1: 7807387-7814264 Arabidopsis thaliana
AT1G22130 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7807387-7812386 Arabidopsis thaliana
AT1G22130 10.0kb upstream 10.0kb upstream 11878 true Chr1: 7812387-7824264 Arabidopsis thaliana
AT1G22130 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7814265-7824264 Arabidopsis thaliana
AT1G22130 10.0kb downstream 10.0kb downstream 11878 true Chr1: 7802387-7814264 Arabidopsis thaliana
AT1G22130 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7802387-7812386 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364592 5261 Brassicaceae View MSA
123838509 5264 Brassicales-Malvales View MSA
124350200 5266 SBM View MSA
124248545 5268 Malvidae View MSA
124063707 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.049     Low  
cufflinks 0.017     Low  
cufflinks 0.081     Low High
cufflinks 0.017     Low  

0 Strain