Gene : AT1G21940 A. thaliana TAIR10
Genomic Order:  2217 Name:  ? AT1G21940
Secondary Identifier:  ? PAC:19653756
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21940 0.5kb upstream 0.5kb upstream 2306 true Chr1: 7715170-7717475 Arabidopsis thaliana
AT1G21940 0.5kb upstream 0.5kb upstream 500 false Chr1: 7716976-7717475 Arabidopsis thaliana
AT1G21940 0.5kb downstream 0.5kb downstream 2306 true Chr1: 7714670-7716975 Arabidopsis thaliana
AT1G21940 0.5kb downstream 0.5kb downstream 500 false Chr1: 7714670-7715169 Arabidopsis thaliana
AT1G21940 1.0kb upstream 1.0kb upstream 2806 true Chr1: 7715170-7717975 Arabidopsis thaliana
AT1G21940 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7716976-7717975 Arabidopsis thaliana
AT1G21940 1.0kb downstream 1.0kb downstream 2806 true Chr1: 7714170-7716975 Arabidopsis thaliana
AT1G21940 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7714170-7715169 Arabidopsis thaliana
AT1G21940 2.0kb upstream 2.0kb upstream 3806 true Chr1: 7715170-7718975 Arabidopsis thaliana
AT1G21940 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7716976-7718975 Arabidopsis thaliana
AT1G21940 2.0kb downstream 2.0kb downstream 3806 true Chr1: 7713170-7716975 Arabidopsis thaliana
AT1G21940 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7713170-7715169 Arabidopsis thaliana
AT1G21940 5.0kb upstream 5.0kb upstream 6806 true Chr1: 7715170-7721975 Arabidopsis thaliana
AT1G21940 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7716976-7721975 Arabidopsis thaliana
AT1G21940 5.0kb downstream 5.0kb downstream 6806 true Chr1: 7710170-7716975 Arabidopsis thaliana
AT1G21940 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7710170-7715169 Arabidopsis thaliana
AT1G21940 10.0kb upstream 10.0kb upstream 11806 true Chr1: 7715170-7726975 Arabidopsis thaliana
AT1G21940 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7716976-7726975 Arabidopsis thaliana
AT1G21940 10.0kb downstream 10.0kb downstream 11806 true Chr1: 7705170-7716975 Arabidopsis thaliana
AT1G21940 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7705170-7715169 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493375 5273 Angiosperm Singleton cluster - no MSA
122328701 5261 Brassicaceae Singleton cluster - no MSA
123770041 5264 Brassicales-Malvales Singleton cluster - no MSA
124268590 5266 SBM Singleton cluster - no MSA
124124780 5268 Malvidae Singleton cluster - no MSA
123853785 5270 Rosid Singleton cluster - no MSA
123439841 5271 Pentapetalae Singleton cluster - no MSA
122475431 5272 Eudicot Singleton cluster - no MSA
120766749 5274 Embryophyte Singleton cluster - no MSA
122809149 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  

0 Strain