Gene : PIP5K1 A. thaliana TAIR10
Primary Identifier:  ? AT1G21980 Defline:  (1 of 4) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED
Genomic Order:  2222 Name:  ? AT1G21980
Secondary Identifier:  ? PAC:19655335
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21980 0.5kb upstream 0.5kb upstream 4423 true Chr1: 7734239-7738661 Arabidopsis thaliana
AT1G21980 0.5kb upstream 0.5kb upstream 500 false Chr1: 7734239-7734738 Arabidopsis thaliana
AT1G21980 0.5kb downstream 0.5kb downstream 4423 true Chr1: 7734739-7739161 Arabidopsis thaliana
AT1G21980 0.5kb downstream 0.5kb downstream 500 false Chr1: 7738662-7739161 Arabidopsis thaliana
AT1G21980 1.0kb upstream 1.0kb upstream 4923 true Chr1: 7733739-7738661 Arabidopsis thaliana
AT1G21980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7733739-7734738 Arabidopsis thaliana
AT1G21980 1.0kb downstream 1.0kb downstream 4923 true Chr1: 7734739-7739661 Arabidopsis thaliana
AT1G21980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7738662-7739661 Arabidopsis thaliana
AT1G21980 2.0kb upstream 2.0kb upstream 5923 true Chr1: 7732739-7738661 Arabidopsis thaliana
AT1G21980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7732739-7734738 Arabidopsis thaliana
AT1G21980 2.0kb downstream 2.0kb downstream 5923 true Chr1: 7734739-7740661 Arabidopsis thaliana
AT1G21980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7738662-7740661 Arabidopsis thaliana
AT1G21980 5.0kb upstream 5.0kb upstream 8923 true Chr1: 7729739-7738661 Arabidopsis thaliana
AT1G21980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7729739-7734738 Arabidopsis thaliana
AT1G21980 5.0kb downstream 5.0kb downstream 8923 true Chr1: 7734739-7743661 Arabidopsis thaliana
AT1G21980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7738662-7743661 Arabidopsis thaliana
AT1G21980 10.0kb upstream 10.0kb upstream 13923 true Chr1: 7724739-7738661 Arabidopsis thaliana
AT1G21980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7724739-7734738 Arabidopsis thaliana
AT1G21980 10.0kb downstream 10.0kb downstream 13923 true Chr1: 7734739-7748661 Arabidopsis thaliana
AT1G21980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7738662-7748661 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362855 5261 Brassicaceae View MSA
123836752 5264 Brassicales-Malvales View MSA
124343464 5266 SBM View MSA
124238939 5268 Malvidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.433        
cufflinks 29.8     High  
cufflinks 7.829        
cufflinks 30.317     High  
cufflinks 6.07       Low
cufflinks 30.018     High  

0 Strain