Gene : AT1G21680 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32161//PTHR32161:SF8 - FAMILY NOT NAMED // PROTEIN TAG-10, ISOFORM A Genomic Order:  2185
Name:  ? AT1G21680 Secondary Identifier:  ? PAC:19654861
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21680 0.5kb upstream 0.5kb upstream 2835 true Chr1: 7612505-7615339 Arabidopsis thaliana
AT1G21680 0.5kb upstream 0.5kb upstream 500 false Chr1: 7612505-7613004 Arabidopsis thaliana
AT1G21680 0.5kb downstream 0.5kb downstream 2835 true Chr1: 7613005-7615839 Arabidopsis thaliana
AT1G21680 0.5kb downstream 0.5kb downstream 500 false Chr1: 7615340-7615839 Arabidopsis thaliana
AT1G21680 1.0kb upstream 1.0kb upstream 3335 true Chr1: 7612005-7615339 Arabidopsis thaliana
AT1G21680 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7612005-7613004 Arabidopsis thaliana
AT1G21680 1.0kb downstream 1.0kb downstream 3335 true Chr1: 7613005-7616339 Arabidopsis thaliana
AT1G21680 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7615340-7616339 Arabidopsis thaliana
AT1G21680 2.0kb upstream 2.0kb upstream 4335 true Chr1: 7611005-7615339 Arabidopsis thaliana
AT1G21680 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7611005-7613004 Arabidopsis thaliana
AT1G21680 2.0kb downstream 2.0kb downstream 4335 true Chr1: 7613005-7617339 Arabidopsis thaliana
AT1G21680 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7615340-7617339 Arabidopsis thaliana
AT1G21680 5.0kb upstream 5.0kb upstream 7335 true Chr1: 7608005-7615339 Arabidopsis thaliana
AT1G21680 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7608005-7613004 Arabidopsis thaliana
AT1G21680 5.0kb downstream 5.0kb downstream 7335 true Chr1: 7613005-7620339 Arabidopsis thaliana
AT1G21680 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7615340-7620339 Arabidopsis thaliana
AT1G21680 10.0kb upstream 10.0kb upstream 12335 true Chr1: 7603005-7615339 Arabidopsis thaliana
AT1G21680 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7603005-7613004 Arabidopsis thaliana
AT1G21680 10.0kb downstream 10.0kb downstream 12335 true Chr1: 7613005-7625339 Arabidopsis thaliana
AT1G21680 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7615340-7625339 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373271 5261 Brassicaceae View MSA
123833868 5264 Brassicales-Malvales View MSA
124338515 5266 SBM View MSA
124239730 5268 Malvidae View MSA
124060689 5270 Rosid View MSA
123739099 5271 Pentapetalae View MSA
122785681 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.026     High  
cufflinks 13.831        
cufflinks 108.919     High  
cufflinks 28.809        
cufflinks 134.789     High High
cufflinks 6.061       Low

0 Strain