Gene : AT1G21610 A. thaliana TAIR10
Defline:  (1 of 2) PTHR21669//PTHR21669:SF13 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS // WOUND-RESPONSIVE FAMILY PROTEIN Genomic Order:  2177
Name:  ? AT1G21610 Secondary Identifier:  ? PAC:19649401
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21610 0.5kb upstream 0.5kb upstream 5535 true Chr1: 7573422-7578956 Arabidopsis thaliana
AT1G21610 0.5kb upstream 0.5kb upstream 500 false Chr1: 7573422-7573921 Arabidopsis thaliana
AT1G21610 0.5kb downstream 0.5kb downstream 5535 true Chr1: 7573922-7579456 Arabidopsis thaliana
AT1G21610 0.5kb downstream 0.5kb downstream 500 false Chr1: 7578957-7579456 Arabidopsis thaliana
AT1G21610 1.0kb upstream 1.0kb upstream 6035 true Chr1: 7572922-7578956 Arabidopsis thaliana
AT1G21610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7572922-7573921 Arabidopsis thaliana
AT1G21610 1.0kb downstream 1.0kb downstream 6035 true Chr1: 7573922-7579956 Arabidopsis thaliana
AT1G21610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7578957-7579956 Arabidopsis thaliana
AT1G21610 2.0kb upstream 2.0kb upstream 7035 true Chr1: 7571922-7578956 Arabidopsis thaliana
AT1G21610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7571922-7573921 Arabidopsis thaliana
AT1G21610 2.0kb downstream 2.0kb downstream 7035 true Chr1: 7573922-7580956 Arabidopsis thaliana
AT1G21610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7578957-7580956 Arabidopsis thaliana
AT1G21610 5.0kb upstream 5.0kb upstream 10035 true Chr1: 7568922-7578956 Arabidopsis thaliana
AT1G21610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7568922-7573921 Arabidopsis thaliana
AT1G21610 5.0kb downstream 5.0kb downstream 10035 true Chr1: 7573922-7583956 Arabidopsis thaliana
AT1G21610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7578957-7583956 Arabidopsis thaliana
AT1G21610 10.0kb upstream 10.0kb upstream 15035 true Chr1: 7563922-7578956 Arabidopsis thaliana
AT1G21610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7563922-7573921 Arabidopsis thaliana
AT1G21610 10.0kb downstream 10.0kb downstream 15035 true Chr1: 7573922-7588956 Arabidopsis thaliana
AT1G21610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7578957-7588956 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379811 5261 Brassicaceae View MSA
123837582 5264 Brassicales-Malvales View MSA
124339372 5266 SBM View MSA
124240339 5268 Malvidae View MSA
124063112 5270 Rosid View MSA
123743839 5271 Pentapetalae View MSA
122787067 5272 Eudicot View MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.576       Low
cufflinks 3.448       High
cufflinks 2.724        
cufflinks 3.426       High
cufflinks 3.185        
cufflinks 2.738        

0 Strain