Gene : AT1G21560 A. thaliana TAIR10
Defline:  (1 of 4) PTHR34194:SF3 - F14J8.16 PROTEIN-RELATED Genomic Order:  2173
Name:  ? AT1G21560 Secondary Identifier:  ? PAC:19649894
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21560 0.5kb upstream 0.5kb upstream 2773 true Chr1: 7554284-7557056 Arabidopsis thaliana
AT1G21560 0.5kb upstream 0.5kb upstream 500 false Chr1: 7554284-7554783 Arabidopsis thaliana
AT1G21560 0.5kb downstream 0.5kb downstream 2773 true Chr1: 7554784-7557556 Arabidopsis thaliana
AT1G21560 0.5kb downstream 0.5kb downstream 500 false Chr1: 7557057-7557556 Arabidopsis thaliana
AT1G21560 1.0kb upstream 1.0kb upstream 3273 true Chr1: 7553784-7557056 Arabidopsis thaliana
AT1G21560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7553784-7554783 Arabidopsis thaliana
AT1G21560 1.0kb downstream 1.0kb downstream 3273 true Chr1: 7554784-7558056 Arabidopsis thaliana
AT1G21560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7557057-7558056 Arabidopsis thaliana
AT1G21560 2.0kb upstream 2.0kb upstream 4273 true Chr1: 7552784-7557056 Arabidopsis thaliana
AT1G21560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7552784-7554783 Arabidopsis thaliana
AT1G21560 2.0kb downstream 2.0kb downstream 4273 true Chr1: 7554784-7559056 Arabidopsis thaliana
AT1G21560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7557057-7559056 Arabidopsis thaliana
AT1G21560 5.0kb upstream 5.0kb upstream 7273 true Chr1: 7549784-7557056 Arabidopsis thaliana
AT1G21560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7549784-7554783 Arabidopsis thaliana
AT1G21560 5.0kb downstream 5.0kb downstream 7273 true Chr1: 7554784-7562056 Arabidopsis thaliana
AT1G21560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7557057-7562056 Arabidopsis thaliana
AT1G21560 10.0kb upstream 10.0kb upstream 12273 true Chr1: 7544784-7557056 Arabidopsis thaliana
AT1G21560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7544784-7554783 Arabidopsis thaliana
AT1G21560 10.0kb downstream 10.0kb downstream 12273 true Chr1: 7554784-7567056 Arabidopsis thaliana
AT1G21560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7557057-7567056 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373505 5261 Brassicaceae View MSA
123831493 5264 Brassicales-Malvales View MSA
124348252 5266 SBM View MSA
124180972 5268 Malvidae View MSA
124069664 5270 Rosid View MSA
123743436 5271 Pentapetalae View MSA
122792304 5272 Eudicot View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.886       High
cufflinks 3.485        
cufflinks 3.563        
cufflinks 3.341        
cufflinks 3.162       Low
cufflinks 3.302        

0 Strain