Gene : SKP2A A. thaliana TAIR10
Primary Identifier:  ? AT1G21410 Defline:  (1 of 2) K03875 - F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2) (SKP2, FBXL1)
Genomic Order:  2158 Name:  ? AT1G21410
Secondary Identifier:  ? PAC:19657027
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21410 0.5kb upstream 0.5kb upstream 2939 true Chr1: 7496641-7499579 Arabidopsis thaliana
AT1G21410 0.5kb upstream 0.5kb upstream 500 false Chr1: 7496641-7497140 Arabidopsis thaliana
AT1G21410 0.5kb downstream 0.5kb downstream 2939 true Chr1: 7497141-7500079 Arabidopsis thaliana
AT1G21410 0.5kb downstream 0.5kb downstream 500 false Chr1: 7499580-7500079 Arabidopsis thaliana
AT1G21410 1.0kb upstream 1.0kb upstream 3439 true Chr1: 7496141-7499579 Arabidopsis thaliana
AT1G21410 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7496141-7497140 Arabidopsis thaliana
AT1G21410 1.0kb downstream 1.0kb downstream 3439 true Chr1: 7497141-7500579 Arabidopsis thaliana
AT1G21410 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7499580-7500579 Arabidopsis thaliana
AT1G21410 2.0kb upstream 2.0kb upstream 4439 true Chr1: 7495141-7499579 Arabidopsis thaliana
AT1G21410 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7495141-7497140 Arabidopsis thaliana
AT1G21410 2.0kb downstream 2.0kb downstream 4439 true Chr1: 7497141-7501579 Arabidopsis thaliana
AT1G21410 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7499580-7501579 Arabidopsis thaliana
AT1G21410 5.0kb upstream 5.0kb upstream 7439 true Chr1: 7492141-7499579 Arabidopsis thaliana
AT1G21410 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7492141-7497140 Arabidopsis thaliana
AT1G21410 5.0kb downstream 5.0kb downstream 7439 true Chr1: 7497141-7504579 Arabidopsis thaliana
AT1G21410 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7499580-7504579 Arabidopsis thaliana
AT1G21410 10.0kb upstream 10.0kb upstream 12439 true Chr1: 7487141-7499579 Arabidopsis thaliana
AT1G21410 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7487141-7497140 Arabidopsis thaliana
AT1G21410 10.0kb downstream 10.0kb downstream 12439 true Chr1: 7497141-7509579 Arabidopsis thaliana
AT1G21410 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7499580-7509579 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378083 5261 Brassicaceae View MSA
123839194 5264 Brassicales-Malvales View MSA
124350425 5266 SBM View MSA
124252410 5268 Malvidae View MSA
124064760 5270 Rosid View MSA
123742186 5271 Pentapetalae View MSA
122792063 5272 Eudicot View MSA
122043251 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121350189 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.019        
cufflinks 6.538        
cufflinks 10.393        
cufflinks 6.978        
cufflinks 13.199       High
cufflinks 4.741       Low

0 Strain