Gene : AT1G20970 A. thaliana TAIR10
Genomic Order:  2116 Name:  ? AT1G20970
Secondary Identifier:  ? PAC:19651909
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20970 0.5kb upstream 0.5kb upstream 6129 true Chr1: 7313446-7319574 Arabidopsis thaliana
AT1G20970 0.5kb upstream 0.5kb upstream 500 false Chr1: 7313446-7313945 Arabidopsis thaliana
AT1G20970 0.5kb downstream 0.5kb downstream 6129 true Chr1: 7313946-7320074 Arabidopsis thaliana
AT1G20970 0.5kb downstream 0.5kb downstream 500 false Chr1: 7319575-7320074 Arabidopsis thaliana
AT1G20970 1.0kb upstream 1.0kb upstream 6629 true Chr1: 7312946-7319574 Arabidopsis thaliana
AT1G20970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7312946-7313945 Arabidopsis thaliana
AT1G20970 1.0kb downstream 1.0kb downstream 6629 true Chr1: 7313946-7320574 Arabidopsis thaliana
AT1G20970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7319575-7320574 Arabidopsis thaliana
AT1G20970 2.0kb upstream 2.0kb upstream 7629 true Chr1: 7311946-7319574 Arabidopsis thaliana
AT1G20970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7311946-7313945 Arabidopsis thaliana
AT1G20970 2.0kb downstream 2.0kb downstream 7629 true Chr1: 7313946-7321574 Arabidopsis thaliana
AT1G20970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7319575-7321574 Arabidopsis thaliana
AT1G20970 5.0kb upstream 5.0kb upstream 10629 true Chr1: 7308946-7319574 Arabidopsis thaliana
AT1G20970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7308946-7313945 Arabidopsis thaliana
AT1G20970 5.0kb downstream 5.0kb downstream 10629 true Chr1: 7313946-7324574 Arabidopsis thaliana
AT1G20970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7319575-7324574 Arabidopsis thaliana
AT1G20970 10.0kb upstream 10.0kb upstream 15629 true Chr1: 7303946-7319574 Arabidopsis thaliana
AT1G20970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7303946-7313945 Arabidopsis thaliana
AT1G20970 10.0kb downstream 10.0kb downstream 15629 true Chr1: 7313946-7329574 Arabidopsis thaliana
AT1G20970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7319575-7329574 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362196 5261 Brassicaceae View MSA
123829958 5264 Brassicales-Malvales View MSA
124349918 5266 SBM View MSA
124243140 5268 Malvidae View MSA
124060811 5270 Rosid View MSA
123746479 5271 Pentapetalae View MSA
122797366 5272 Eudicot View MSA
122049641 5273 Angiosperm View MSA
121311518 5274 Embryophyte View MSA
123348804 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.923        
cufflinks 29.451     High  
cufflinks 17.58       Low
cufflinks 30.445     High  
cufflinks 22.742        
cufflinks 33.64     High High

0 Strain