Gene : AT1G21080 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24078:SF219 - DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN Genomic Order:  2125
Name:  ? AT1G21080 Secondary Identifier:  ? PAC:19651713
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21080 0.5kb upstream 0.5kb upstream 4624 true Chr1: 7378538-7383161 Arabidopsis thaliana
AT1G21080 0.5kb upstream 0.5kb upstream 500 false Chr1: 7382662-7383161 Arabidopsis thaliana
AT1G21080 0.5kb downstream 0.5kb downstream 4624 true Chr1: 7378038-7382661 Arabidopsis thaliana
AT1G21080 0.5kb downstream 0.5kb downstream 500 false Chr1: 7378038-7378537 Arabidopsis thaliana
AT1G21080 1.0kb upstream 1.0kb upstream 5124 true Chr1: 7378538-7383661 Arabidopsis thaliana
AT1G21080 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7382662-7383661 Arabidopsis thaliana
AT1G21080 1.0kb downstream 1.0kb downstream 5124 true Chr1: 7377538-7382661 Arabidopsis thaliana
AT1G21080 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7377538-7378537 Arabidopsis thaliana
AT1G21080 2.0kb upstream 2.0kb upstream 6124 true Chr1: 7378538-7384661 Arabidopsis thaliana
AT1G21080 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7382662-7384661 Arabidopsis thaliana
AT1G21080 2.0kb downstream 2.0kb downstream 6124 true Chr1: 7376538-7382661 Arabidopsis thaliana
AT1G21080 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7376538-7378537 Arabidopsis thaliana
AT1G21080 5.0kb upstream 5.0kb upstream 9124 true Chr1: 7378538-7387661 Arabidopsis thaliana
AT1G21080 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7382662-7387661 Arabidopsis thaliana
AT1G21080 5.0kb downstream 5.0kb downstream 9124 true Chr1: 7373538-7382661 Arabidopsis thaliana
AT1G21080 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7373538-7378537 Arabidopsis thaliana
AT1G21080 10.0kb upstream 10.0kb upstream 14124 true Chr1: 7378538-7392661 Arabidopsis thaliana
AT1G21080 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7382662-7392661 Arabidopsis thaliana
AT1G21080 10.0kb downstream 10.0kb downstream 14124 true Chr1: 7368538-7382661 Arabidopsis thaliana
AT1G21080 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7368538-7378537 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373578 5261 Brassicaceae View MSA
123839791 5264 Brassicales-Malvales View MSA
124338861 5266 SBM View MSA
124239036 5268 Malvidae View MSA
124068757 5270 Rosid View MSA
123743691 5271 Pentapetalae View MSA
122791092 5272 Eudicot View MSA
122049715 5273 Angiosperm View MSA
121349563 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.475        
cufflinks 8.704       High
cufflinks 3.538       Low
cufflinks 6.768        
cufflinks 4.393        
cufflinks 9.195       High

0 Strain