Gene : AT1G20760 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11216//PTHR11216:SF72 - EH DOMAIN // CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  2090
Name:  ? AT1G20760 Secondary Identifier:  ? PAC:19652079
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20760 0.5kb upstream 0.5kb upstream 6125 true Chr1: 7208869-7214993 Arabidopsis thaliana
AT1G20760 0.5kb upstream 0.5kb upstream 500 false Chr1: 7208869-7209368 Arabidopsis thaliana
AT1G20760 0.5kb downstream 0.5kb downstream 6125 true Chr1: 7209369-7215493 Arabidopsis thaliana
AT1G20760 0.5kb downstream 0.5kb downstream 500 false Chr1: 7214994-7215493 Arabidopsis thaliana
AT1G20760 1.0kb upstream 1.0kb upstream 6625 true Chr1: 7208369-7214993 Arabidopsis thaliana
AT1G20760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7208369-7209368 Arabidopsis thaliana
AT1G20760 1.0kb downstream 1.0kb downstream 6625 true Chr1: 7209369-7215993 Arabidopsis thaliana
AT1G20760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7214994-7215993 Arabidopsis thaliana
AT1G20760 2.0kb upstream 2.0kb upstream 7625 true Chr1: 7207369-7214993 Arabidopsis thaliana
AT1G20760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7207369-7209368 Arabidopsis thaliana
AT1G20760 2.0kb downstream 2.0kb downstream 7625 true Chr1: 7209369-7216993 Arabidopsis thaliana
AT1G20760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7214994-7216993 Arabidopsis thaliana
AT1G20760 5.0kb upstream 5.0kb upstream 10625 true Chr1: 7204369-7214993 Arabidopsis thaliana
AT1G20760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7204369-7209368 Arabidopsis thaliana
AT1G20760 5.0kb downstream 5.0kb downstream 10625 true Chr1: 7209369-7219993 Arabidopsis thaliana
AT1G20760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7214994-7219993 Arabidopsis thaliana
AT1G20760 10.0kb upstream 10.0kb upstream 15625 true Chr1: 7199369-7214993 Arabidopsis thaliana
AT1G20760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7199369-7209368 Arabidopsis thaliana
AT1G20760 10.0kb downstream 10.0kb downstream 15625 true Chr1: 7209369-7224993 Arabidopsis thaliana
AT1G20760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7214994-7224993 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373242 5261 Brassicaceae View MSA
123833011 5264 Brassicales-Malvales View MSA
124346416 5266 SBM View MSA
124252000 5268 Malvidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.223        
cufflinks 13.773        
cufflinks 9.08       Low
cufflinks 16.308        
cufflinks 10.237        
cufflinks 17.362       High

0 Strain