Gene : AT1G20520 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31509:SF6 - F5M15.16 Genomic Order:  2063
Name:  ? AT1G20520 Secondary Identifier:  ? PAC:19657798
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20520 0.5kb upstream 0.5kb upstream 1196 true Chr1: 7106922-7108117 Arabidopsis thaliana
AT1G20520 0.5kb upstream 0.5kb upstream 500 false Chr1: 7107618-7108117 Arabidopsis thaliana
AT1G20520 0.5kb downstream 0.5kb downstream 1196 true Chr1: 7106422-7107617 Arabidopsis thaliana
AT1G20520 0.5kb downstream 0.5kb downstream 500 false Chr1: 7106422-7106921 Arabidopsis thaliana
AT1G20520 1.0kb upstream 1.0kb upstream 1696 true Chr1: 7106922-7108617 Arabidopsis thaliana
AT1G20520 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7107618-7108617 Arabidopsis thaliana
AT1G20520 1.0kb downstream 1.0kb downstream 1696 true Chr1: 7105922-7107617 Arabidopsis thaliana
AT1G20520 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7105922-7106921 Arabidopsis thaliana
AT1G20520 2.0kb upstream 2.0kb upstream 2696 true Chr1: 7106922-7109617 Arabidopsis thaliana
AT1G20520 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7107618-7109617 Arabidopsis thaliana
AT1G20520 2.0kb downstream 2.0kb downstream 2696 true Chr1: 7104922-7107617 Arabidopsis thaliana
AT1G20520 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7104922-7106921 Arabidopsis thaliana
AT1G20520 5.0kb upstream 5.0kb upstream 5696 true Chr1: 7106922-7112617 Arabidopsis thaliana
AT1G20520 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7107618-7112617 Arabidopsis thaliana
AT1G20520 5.0kb downstream 5.0kb downstream 5696 true Chr1: 7101922-7107617 Arabidopsis thaliana
AT1G20520 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7101922-7106921 Arabidopsis thaliana
AT1G20520 10.0kb upstream 10.0kb upstream 10696 true Chr1: 7106922-7117617 Arabidopsis thaliana
AT1G20520 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7107618-7117617 Arabidopsis thaliana
AT1G20520 10.0kb downstream 10.0kb downstream 10696 true Chr1: 7096922-7107617 Arabidopsis thaliana
AT1G20520 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7096922-7106921 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378395 5261 Brassicaceae View MSA
123838857 5264 Brassicales-Malvales View MSA
124322506 5266 SBM View MSA
124238730 5268 Malvidae View MSA
124066569 5270 Rosid View MSA
123738902 5271 Pentapetalae View MSA
122788328 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.125     Low  
cufflinks 1.139       High
cufflinks 0.236     Low  
cufflinks 0.608        
cufflinks 0.062     Low Low
cufflinks 1.118       High

0 Strain