Gene : EXPA11 A. thaliana TAIR10
Primary Identifier:  ? AT1G20190 Defline:  (1 of 1) PTHR31867//PTHR31867:SF4 - FAMILY NOT NAMED // EXPANSIN-A11
Genomic Order:  2032 Name:  ? AT1G20190
Secondary Identifier:  ? PAC:19653530
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Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20190 0.5kb upstream 0.5kb upstream 1829 true Chr1: 6998489-7000317 Arabidopsis thaliana
AT1G20190 0.5kb upstream 0.5kb upstream 500 false Chr1: 6999818-7000317 Arabidopsis thaliana
AT1G20190 0.5kb downstream 0.5kb downstream 1829 true Chr1: 6997989-6999817 Arabidopsis thaliana
AT1G20190 0.5kb downstream 0.5kb downstream 500 false Chr1: 6997989-6998488 Arabidopsis thaliana
AT1G20190 1.0kb upstream 1.0kb upstream 2329 true Chr1: 6998489-7000817 Arabidopsis thaliana
AT1G20190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6999818-7000817 Arabidopsis thaliana
AT1G20190 1.0kb downstream 1.0kb downstream 2329 true Chr1: 6997489-6999817 Arabidopsis thaliana
AT1G20190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6997489-6998488 Arabidopsis thaliana
AT1G20190 2.0kb upstream 2.0kb upstream 3329 true Chr1: 6998489-7001817 Arabidopsis thaliana
AT1G20190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6999818-7001817 Arabidopsis thaliana
AT1G20190 2.0kb downstream 2.0kb downstream 3329 true Chr1: 6996489-6999817 Arabidopsis thaliana
AT1G20190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6996489-6998488 Arabidopsis thaliana
AT1G20190 5.0kb upstream 5.0kb upstream 6329 true Chr1: 6998489-7004817 Arabidopsis thaliana
AT1G20190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6999818-7004817 Arabidopsis thaliana
AT1G20190 5.0kb downstream 5.0kb downstream 6329 true Chr1: 6993489-6999817 Arabidopsis thaliana
AT1G20190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6993489-6998488 Arabidopsis thaliana
AT1G20190 10.0kb upstream 10.0kb upstream 11329 true Chr1: 6998489-7009817 Arabidopsis thaliana
AT1G20190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6999818-7009817 Arabidopsis thaliana
AT1G20190 10.0kb downstream 10.0kb downstream 11329 true Chr1: 6988489-6999817 Arabidopsis thaliana
AT1G20190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6988489-6998488 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377764 5261 Brassicaceae View MSA
123837197 5264 Brassicales-Malvales View MSA
124344805 5266 SBM View MSA
124237761 5268 Malvidae View MSA
124073729 5270 Rosid View MSA
123747449 5271 Pentapetalae View MSA
122792486 5272 Eudicot View MSA
122042176 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121348621 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.283        
cufflinks 2.092       Low
cufflinks 16.399        
cufflinks 5.734        
cufflinks 12.74        
cufflinks 7.883        

0 Strain