Gene : AT1G19835 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31580//PTHR31580:SF4 - FAMILY NOT NAMED // FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  1995
Name:  ? AT1G19835 Secondary Identifier:  ? PAC:19652952
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19835 0.5kb upstream 0.5kb upstream 4992 true Chr1: 6855952-6860943 Arabidopsis thaliana
AT1G19835 0.5kb upstream 0.5kb upstream 500 false Chr1: 6860444-6860943 Arabidopsis thaliana
AT1G19835 0.5kb downstream 0.5kb downstream 4992 true Chr1: 6855452-6860443 Arabidopsis thaliana
AT1G19835 0.5kb downstream 0.5kb downstream 500 false Chr1: 6855452-6855951 Arabidopsis thaliana
AT1G19835 1.0kb upstream 1.0kb upstream 5492 true Chr1: 6855952-6861443 Arabidopsis thaliana
AT1G19835 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6860444-6861443 Arabidopsis thaliana
AT1G19835 1.0kb downstream 1.0kb downstream 5492 true Chr1: 6854952-6860443 Arabidopsis thaliana
AT1G19835 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6854952-6855951 Arabidopsis thaliana
AT1G19835 2.0kb upstream 2.0kb upstream 6492 true Chr1: 6855952-6862443 Arabidopsis thaliana
AT1G19835 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6860444-6862443 Arabidopsis thaliana
AT1G19835 2.0kb downstream 2.0kb downstream 6492 true Chr1: 6853952-6860443 Arabidopsis thaliana
AT1G19835 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6853952-6855951 Arabidopsis thaliana
AT1G19835 5.0kb upstream 5.0kb upstream 9492 true Chr1: 6855952-6865443 Arabidopsis thaliana
AT1G19835 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6860444-6865443 Arabidopsis thaliana
AT1G19835 5.0kb downstream 5.0kb downstream 9492 true Chr1: 6850952-6860443 Arabidopsis thaliana
AT1G19835 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6850952-6855951 Arabidopsis thaliana
AT1G19835 10.0kb upstream 10.0kb upstream 14492 true Chr1: 6855952-6870443 Arabidopsis thaliana
AT1G19835 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6860444-6870443 Arabidopsis thaliana
AT1G19835 10.0kb downstream 10.0kb downstream 14492 true Chr1: 6845952-6860443 Arabidopsis thaliana
AT1G19835 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6845952-6855951 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374314 5261 Brassicaceae View MSA
123841089 5264 Brassicales-Malvales View MSA
124343688 5266 SBM View MSA
124252265 5268 Malvidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.259        
cufflinks 36.523     High  
cufflinks 11.114       Low
cufflinks 34.814     High  
cufflinks 9.88       Low
cufflinks 35.935     High  

0 Strain