Gene : FNR2 A. thaliana TAIR10
Primary Identifier:  ? AT1G20020 Defline:  (1 of 2) PTHR19384//PTHR19384:SF82 - FLAVODOXIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  2014 Name:  ? AT1G20020
Secondary Identifier:  ? PAC:19651016
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20020 0.5kb upstream 0.5kb upstream 2802 true Chr1: 6942217-6945018 Arabidopsis thaliana
AT1G20020 0.5kb upstream 0.5kb upstream 500 false Chr1: 6942217-6942716 Arabidopsis thaliana
AT1G20020 0.5kb downstream 0.5kb downstream 2802 true Chr1: 6942717-6945518 Arabidopsis thaliana
AT1G20020 0.5kb downstream 0.5kb downstream 500 false Chr1: 6945019-6945518 Arabidopsis thaliana
AT1G20020 1.0kb upstream 1.0kb upstream 3302 true Chr1: 6941717-6945018 Arabidopsis thaliana
AT1G20020 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6941717-6942716 Arabidopsis thaliana
AT1G20020 1.0kb downstream 1.0kb downstream 3302 true Chr1: 6942717-6946018 Arabidopsis thaliana
AT1G20020 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6945019-6946018 Arabidopsis thaliana
AT1G20020 2.0kb upstream 2.0kb upstream 4302 true Chr1: 6940717-6945018 Arabidopsis thaliana
AT1G20020 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6940717-6942716 Arabidopsis thaliana
AT1G20020 2.0kb downstream 2.0kb downstream 4302 true Chr1: 6942717-6947018 Arabidopsis thaliana
AT1G20020 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6945019-6947018 Arabidopsis thaliana
AT1G20020 5.0kb upstream 5.0kb upstream 7302 true Chr1: 6937717-6945018 Arabidopsis thaliana
AT1G20020 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6937717-6942716 Arabidopsis thaliana
AT1G20020 5.0kb downstream 5.0kb downstream 7302 true Chr1: 6942717-6950018 Arabidopsis thaliana
AT1G20020 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6945019-6950018 Arabidopsis thaliana
AT1G20020 10.0kb upstream 10.0kb upstream 12302 true Chr1: 6932717-6945018 Arabidopsis thaliana
AT1G20020 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6932717-6942716 Arabidopsis thaliana
AT1G20020 10.0kb downstream 10.0kb downstream 12302 true Chr1: 6942717-6955018 Arabidopsis thaliana
AT1G20020 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6945019-6955018 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371092 5261 Brassicaceae View MSA
123836263 5264 Brassicales-Malvales View MSA
124346878 5266 SBM View MSA
124237795 5268 Malvidae View MSA
124067432 5270 Rosid View MSA
123738149 5271 Pentapetalae View MSA
122792812 5272 Eudicot View MSA
122047092 5273 Angiosperm View MSA
121345417 5274 Embryophyte View MSA
123380214 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 182.777     High  
cufflinks 0.843        
cufflinks 191.277     High  
cufflinks 0.712        
cufflinks 165.036     High  
cufflinks 0.649        

0 Strain