Gene : AT1G19715 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23244:SF249 - MANNOSE-BINDING LECTIN SUPERFAMILY PROTEIN Genomic Order:  1985
Name:  ? AT1G19715 Secondary Identifier:  ? PAC:19649280
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19715 0.5kb upstream 0.5kb upstream 3341 true Chr1: 6816702-6820042 Arabidopsis thaliana
AT1G19715 0.5kb upstream 0.5kb upstream 500 false Chr1: 6819543-6820042 Arabidopsis thaliana
AT1G19715 0.5kb downstream 0.5kb downstream 3341 true Chr1: 6816202-6819542 Arabidopsis thaliana
AT1G19715 0.5kb downstream 0.5kb downstream 500 false Chr1: 6816202-6816701 Arabidopsis thaliana
AT1G19715 1.0kb upstream 1.0kb upstream 3841 true Chr1: 6816702-6820542 Arabidopsis thaliana
AT1G19715 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6819543-6820542 Arabidopsis thaliana
AT1G19715 1.0kb downstream 1.0kb downstream 3841 true Chr1: 6815702-6819542 Arabidopsis thaliana
AT1G19715 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6815702-6816701 Arabidopsis thaliana
AT1G19715 2.0kb upstream 2.0kb upstream 4841 true Chr1: 6816702-6821542 Arabidopsis thaliana
AT1G19715 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6819543-6821542 Arabidopsis thaliana
AT1G19715 2.0kb downstream 2.0kb downstream 4841 true Chr1: 6814702-6819542 Arabidopsis thaliana
AT1G19715 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6814702-6816701 Arabidopsis thaliana
AT1G19715 5.0kb upstream 5.0kb upstream 7841 true Chr1: 6816702-6824542 Arabidopsis thaliana
AT1G19715 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6819543-6824542 Arabidopsis thaliana
AT1G19715 5.0kb downstream 5.0kb downstream 7841 true Chr1: 6811702-6819542 Arabidopsis thaliana
AT1G19715 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6811702-6816701 Arabidopsis thaliana
AT1G19715 10.0kb upstream 10.0kb upstream 12841 true Chr1: 6816702-6829542 Arabidopsis thaliana
AT1G19715 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6819543-6829542 Arabidopsis thaliana
AT1G19715 10.0kb downstream 10.0kb downstream 12841 true Chr1: 6806702-6819542 Arabidopsis thaliana
AT1G19715 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6806702-6816701 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361263 5261 Brassicaceae View MSA
123834745 5264 Brassicales-Malvales View MSA
124344777 5266 SBM View MSA
124252424 5268 Malvidae View MSA
124064423 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.132        
cufflinks 7.155        
cufflinks 9.088        
cufflinks 4.866       Low
cufflinks 8.663        
cufflinks 4.778       Low

0 Strain