Gene : AT1G19230 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11972//PTHR11972:SF44 - NADPH OXIDASE // RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E Genomic Order:  1936
Name:  ? AT1G19230 Secondary Identifier:  ? PAC:19649420
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19230 0.5kb upstream 0.5kb upstream 5687 true Chr1: 6643689-6649375 Arabidopsis thaliana
AT1G19230 0.5kb upstream 0.5kb upstream 500 false Chr1: 6643689-6644188 Arabidopsis thaliana
AT1G19230 0.5kb downstream 0.5kb downstream 5687 true Chr1: 6644189-6649875 Arabidopsis thaliana
AT1G19230 0.5kb downstream 0.5kb downstream 500 false Chr1: 6649376-6649875 Arabidopsis thaliana
AT1G19230 1.0kb upstream 1.0kb upstream 6187 true Chr1: 6643189-6649375 Arabidopsis thaliana
AT1G19230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6643189-6644188 Arabidopsis thaliana
AT1G19230 1.0kb downstream 1.0kb downstream 6187 true Chr1: 6644189-6650375 Arabidopsis thaliana
AT1G19230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6649376-6650375 Arabidopsis thaliana
AT1G19230 2.0kb upstream 2.0kb upstream 7187 true Chr1: 6642189-6649375 Arabidopsis thaliana
AT1G19230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6642189-6644188 Arabidopsis thaliana
AT1G19230 2.0kb downstream 2.0kb downstream 7187 true Chr1: 6644189-6651375 Arabidopsis thaliana
AT1G19230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6649376-6651375 Arabidopsis thaliana
AT1G19230 5.0kb upstream 5.0kb upstream 10187 true Chr1: 6639189-6649375 Arabidopsis thaliana
AT1G19230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6639189-6644188 Arabidopsis thaliana
AT1G19230 5.0kb downstream 5.0kb downstream 10187 true Chr1: 6644189-6654375 Arabidopsis thaliana
AT1G19230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6649376-6654375 Arabidopsis thaliana
AT1G19230 10.0kb upstream 10.0kb upstream 15187 true Chr1: 6634189-6649375 Arabidopsis thaliana
AT1G19230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6634189-6644188 Arabidopsis thaliana
AT1G19230 10.0kb downstream 10.0kb downstream 15187 true Chr1: 6644189-6659375 Arabidopsis thaliana
AT1G19230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6649376-6659375 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375696 5261 Brassicaceae View MSA
123831451 5264 Brassicales-Malvales View MSA
124339471 5266 SBM View MSA
124242422 5268 Malvidae View MSA
124066412 5270 Rosid View MSA
123737833 5271 Pentapetalae View MSA
122791014 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low Low
cufflinks 1.038        
cufflinks 0.073     Low  
cufflinks 1.564       High
cufflinks 0.131     Low  
cufflinks 1.429        

0 Strain