Gene : AT1G18950 A. thaliana TAIR10
Defline:  (1 of 8) PF02791 - DDT domain (DDT) Genomic Order:  1906
Name:  ? AT1G18950 Secondary Identifier:  ? PAC:19650539
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18950 0.5kb upstream 0.5kb upstream 5989 true Chr1: 6545899-6551887 Arabidopsis thaliana
AT1G18950 0.5kb upstream 0.5kb upstream 500 false Chr1: 6545899-6546398 Arabidopsis thaliana
AT1G18950 0.5kb downstream 0.5kb downstream 5989 true Chr1: 6546399-6552387 Arabidopsis thaliana
AT1G18950 0.5kb downstream 0.5kb downstream 500 false Chr1: 6551888-6552387 Arabidopsis thaliana
AT1G18950 1.0kb upstream 1.0kb upstream 6489 true Chr1: 6545399-6551887 Arabidopsis thaliana
AT1G18950 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6545399-6546398 Arabidopsis thaliana
AT1G18950 1.0kb downstream 1.0kb downstream 6489 true Chr1: 6546399-6552887 Arabidopsis thaliana
AT1G18950 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6551888-6552887 Arabidopsis thaliana
AT1G18950 2.0kb upstream 2.0kb upstream 7489 true Chr1: 6544399-6551887 Arabidopsis thaliana
AT1G18950 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6544399-6546398 Arabidopsis thaliana
AT1G18950 2.0kb downstream 2.0kb downstream 7489 true Chr1: 6546399-6553887 Arabidopsis thaliana
AT1G18950 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6551888-6553887 Arabidopsis thaliana
AT1G18950 5.0kb upstream 5.0kb upstream 10489 true Chr1: 6541399-6551887 Arabidopsis thaliana
AT1G18950 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6541399-6546398 Arabidopsis thaliana
AT1G18950 5.0kb downstream 5.0kb downstream 10489 true Chr1: 6546399-6556887 Arabidopsis thaliana
AT1G18950 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6551888-6556887 Arabidopsis thaliana
AT1G18950 10.0kb upstream 10.0kb upstream 15489 true Chr1: 6536399-6551887 Arabidopsis thaliana
AT1G18950 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6536399-6546398 Arabidopsis thaliana
AT1G18950 10.0kb downstream 10.0kb downstream 15489 true Chr1: 6546399-6561887 Arabidopsis thaliana
AT1G18950 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6551888-6561887 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360264 5261 Brassicaceae View MSA
123829972 5264 Brassicales-Malvales View MSA
124337746 5266 SBM View MSA
124241696 5268 Malvidae View MSA
124063029 5270 Rosid View MSA
123740242 5271 Pentapetalae View MSA
122790734 5272 Eudicot View MSA
122047444 5273 Angiosperm View MSA
121350354 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.751        
cufflinks 10.022        
cufflinks 6.327        
cufflinks 10.547       High
cufflinks 6.323        
cufflinks 9.335        

0 Strain