Gene : AT1G19000 A. thaliana TAIR10
Defline:  (1 of 3) PTHR12374:SF26 - F25A4.19 PROTEIN Genomic Order:  1911
Name:  ? AT1G19000 Secondary Identifier:  ? PAC:19653461
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19000 0.5kb upstream 0.5kb upstream 2495 true Chr1: 6560792-6563286 Arabidopsis thaliana
AT1G19000 0.5kb upstream 0.5kb upstream 500 false Chr1: 6562787-6563286 Arabidopsis thaliana
AT1G19000 0.5kb downstream 0.5kb downstream 2495 true Chr1: 6560292-6562786 Arabidopsis thaliana
AT1G19000 0.5kb downstream 0.5kb downstream 500 false Chr1: 6560292-6560791 Arabidopsis thaliana
AT1G19000 1.0kb upstream 1.0kb upstream 2995 true Chr1: 6560792-6563786 Arabidopsis thaliana
AT1G19000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6562787-6563786 Arabidopsis thaliana
AT1G19000 1.0kb downstream 1.0kb downstream 2995 true Chr1: 6559792-6562786 Arabidopsis thaliana
AT1G19000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6559792-6560791 Arabidopsis thaliana
AT1G19000 2.0kb upstream 2.0kb upstream 3995 true Chr1: 6560792-6564786 Arabidopsis thaliana
AT1G19000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6562787-6564786 Arabidopsis thaliana
AT1G19000 2.0kb downstream 2.0kb downstream 3995 true Chr1: 6558792-6562786 Arabidopsis thaliana
AT1G19000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6558792-6560791 Arabidopsis thaliana
AT1G19000 5.0kb upstream 5.0kb upstream 6995 true Chr1: 6560792-6567786 Arabidopsis thaliana
AT1G19000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6562787-6567786 Arabidopsis thaliana
AT1G19000 5.0kb downstream 5.0kb downstream 6995 true Chr1: 6555792-6562786 Arabidopsis thaliana
AT1G19000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6555792-6560791 Arabidopsis thaliana
AT1G19000 10.0kb upstream 10.0kb upstream 11995 true Chr1: 6560792-6572786 Arabidopsis thaliana
AT1G19000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6562787-6572786 Arabidopsis thaliana
AT1G19000 10.0kb downstream 10.0kb downstream 11995 true Chr1: 6550792-6562786 Arabidopsis thaliana
AT1G19000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6550792-6560791 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375739 5261 Brassicaceae View MSA
123838030 5264 Brassicales-Malvales View MSA
124342153 5266 SBM View MSA
124239385 5268 Malvidae View MSA
124069217 5270 Rosid View MSA
123738697 5271 Pentapetalae View MSA
122794974 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.464     High High
cufflinks 24.563        
cufflinks 49.163     High  
cufflinks 29.765        
cufflinks 41.995     High  
cufflinks 23.469       Low

0 Strain