Gene : AT1G18700 A. thaliana TAIR10
Defline:  DNAJ heat shock N-terminal domain-containing protein Genomic Order:  1881
Name:  ? AT1G18700 Secondary Identifier:  ? PAC:19656614
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18700 0.5kb upstream 0.5kb upstream 7100 true Chr1: 6436977-6444076 Arabidopsis thaliana
AT1G18700 0.5kb upstream 0.5kb upstream 500 false Chr1: 6436977-6437476 Arabidopsis thaliana
AT1G18700 0.5kb downstream 0.5kb downstream 7100 true Chr1: 6437477-6444576 Arabidopsis thaliana
AT1G18700 0.5kb downstream 0.5kb downstream 500 false Chr1: 6444077-6444576 Arabidopsis thaliana
AT1G18700 1.0kb upstream 1.0kb upstream 7600 true Chr1: 6436477-6444076 Arabidopsis thaliana
AT1G18700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6436477-6437476 Arabidopsis thaliana
AT1G18700 1.0kb downstream 1.0kb downstream 7600 true Chr1: 6437477-6445076 Arabidopsis thaliana
AT1G18700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6444077-6445076 Arabidopsis thaliana
AT1G18700 2.0kb upstream 2.0kb upstream 8600 true Chr1: 6435477-6444076 Arabidopsis thaliana
AT1G18700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6435477-6437476 Arabidopsis thaliana
AT1G18700 2.0kb downstream 2.0kb downstream 8600 true Chr1: 6437477-6446076 Arabidopsis thaliana
AT1G18700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6444077-6446076 Arabidopsis thaliana
AT1G18700 5.0kb upstream 5.0kb upstream 11600 true Chr1: 6432477-6444076 Arabidopsis thaliana
AT1G18700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6432477-6437476 Arabidopsis thaliana
AT1G18700 5.0kb downstream 5.0kb downstream 11600 true Chr1: 6437477-6449076 Arabidopsis thaliana
AT1G18700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6444077-6449076 Arabidopsis thaliana
AT1G18700 10.0kb upstream 10.0kb upstream 16600 true Chr1: 6427477-6444076 Arabidopsis thaliana
AT1G18700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6427477-6437476 Arabidopsis thaliana
AT1G18700 10.0kb downstream 10.0kb downstream 16600 true Chr1: 6437477-6454076 Arabidopsis thaliana
AT1G18700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6444077-6454076 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371503 5261 Brassicaceae View MSA
123827671 5264 Brassicales-Malvales View MSA
124338353 5266 SBM View MSA
124239364 5268 Malvidae View MSA
124067065 5270 Rosid View MSA
123737708 5271 Pentapetalae View MSA
122787741 5272 Eudicot View MSA
122042511 5273 Angiosperm View MSA
121347430 5274 Embryophyte View MSA
123426149 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.723        
cufflinks 2.357        
cufflinks 1.517       Low
cufflinks 2.446       High
cufflinks 1.655        
cufflinks 2.204        

0 Strain