Gene : AGL65 A. thaliana TAIR10
Primary Identifier:  ? AT1G18750 Defline:  (1 of 1) PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED
Genomic Order:  1886 Name:  ? AT1G18750
Secondary Identifier:  ? PAC:19654582
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18750 0.5kb upstream 0.5kb upstream 3724 true Chr1: 6466261-6469984 Arabidopsis thaliana
AT1G18750 0.5kb upstream 0.5kb upstream 500 false Chr1: 6466261-6466760 Arabidopsis thaliana
AT1G18750 0.5kb downstream 0.5kb downstream 3724 true Chr1: 6466761-6470484 Arabidopsis thaliana
AT1G18750 0.5kb downstream 0.5kb downstream 500 false Chr1: 6469985-6470484 Arabidopsis thaliana
AT1G18750 1.0kb upstream 1.0kb upstream 4224 true Chr1: 6465761-6469984 Arabidopsis thaliana
AT1G18750 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6465761-6466760 Arabidopsis thaliana
AT1G18750 1.0kb downstream 1.0kb downstream 4224 true Chr1: 6466761-6470984 Arabidopsis thaliana
AT1G18750 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6469985-6470984 Arabidopsis thaliana
AT1G18750 2.0kb upstream 2.0kb upstream 5224 true Chr1: 6464761-6469984 Arabidopsis thaliana
AT1G18750 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6464761-6466760 Arabidopsis thaliana
AT1G18750 2.0kb downstream 2.0kb downstream 5224 true Chr1: 6466761-6471984 Arabidopsis thaliana
AT1G18750 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6469985-6471984 Arabidopsis thaliana
AT1G18750 5.0kb upstream 5.0kb upstream 8224 true Chr1: 6461761-6469984 Arabidopsis thaliana
AT1G18750 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6461761-6466760 Arabidopsis thaliana
AT1G18750 5.0kb downstream 5.0kb downstream 8224 true Chr1: 6466761-6474984 Arabidopsis thaliana
AT1G18750 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6469985-6474984 Arabidopsis thaliana
AT1G18750 10.0kb upstream 10.0kb upstream 13224 true Chr1: 6456761-6469984 Arabidopsis thaliana
AT1G18750 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6456761-6466760 Arabidopsis thaliana
AT1G18750 10.0kb downstream 10.0kb downstream 13224 true Chr1: 6466761-6479984 Arabidopsis thaliana
AT1G18750 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6469985-6479984 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365695 5261 Brassicaceae View MSA
123827754 5264 Brassicales-Malvales View MSA
124351043 5266 SBM View MSA
124244447 5268 Malvidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.504       High
cufflinks 0.621        
cufflinks 1.284        
cufflinks 0.715        
cufflinks 1.19        
cufflinks 0.44       Low

0 Strain