Gene : NRP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G18800 Defline:  (1 of 2) K11290 - template-activating factor I (SET, TAF1, I2PP2A)
Genomic Order:  1892 Name:  ? AT1G18800
Secondary Identifier:  ? PAC:19649570
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18800 0.5kb upstream 0.5kb upstream 2984 true Chr1: 6481113-6484096 Arabidopsis thaliana
AT1G18800 0.5kb upstream 0.5kb upstream 500 false Chr1: 6483597-6484096 Arabidopsis thaliana
AT1G18800 0.5kb downstream 0.5kb downstream 2984 true Chr1: 6480613-6483596 Arabidopsis thaliana
AT1G18800 0.5kb downstream 0.5kb downstream 500 false Chr1: 6480613-6481112 Arabidopsis thaliana
AT1G18800 1.0kb upstream 1.0kb upstream 3484 true Chr1: 6481113-6484596 Arabidopsis thaliana
AT1G18800 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6483597-6484596 Arabidopsis thaliana
AT1G18800 1.0kb downstream 1.0kb downstream 3484 true Chr1: 6480113-6483596 Arabidopsis thaliana
AT1G18800 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6480113-6481112 Arabidopsis thaliana
AT1G18800 2.0kb upstream 2.0kb upstream 4484 true Chr1: 6481113-6485596 Arabidopsis thaliana
AT1G18800 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6483597-6485596 Arabidopsis thaliana
AT1G18800 2.0kb downstream 2.0kb downstream 4484 true Chr1: 6479113-6483596 Arabidopsis thaliana
AT1G18800 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6479113-6481112 Arabidopsis thaliana
AT1G18800 5.0kb upstream 5.0kb upstream 7484 true Chr1: 6481113-6488596 Arabidopsis thaliana
AT1G18800 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6483597-6488596 Arabidopsis thaliana
AT1G18800 5.0kb downstream 5.0kb downstream 7484 true Chr1: 6476113-6483596 Arabidopsis thaliana
AT1G18800 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6476113-6481112 Arabidopsis thaliana
AT1G18800 10.0kb upstream 10.0kb upstream 12484 true Chr1: 6481113-6493596 Arabidopsis thaliana
AT1G18800 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6483597-6493596 Arabidopsis thaliana
AT1G18800 10.0kb downstream 10.0kb downstream 12484 true Chr1: 6471113-6483596 Arabidopsis thaliana
AT1G18800 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6471113-6481112 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380425 5261 Brassicaceae View MSA
123836930 5264 Brassicales-Malvales View MSA
124346905 5266 SBM View MSA
124245344 5268 Malvidae View MSA
124073119 5270 Rosid View MSA
123751340 5271 Pentapetalae View MSA
122794280 5272 Eudicot View MSA
122049668 5273 Angiosperm View MSA
121348262 5274 Embryophyte View MSA
123426622 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.598        
cufflinks 21.469        
cufflinks 9.344        
cufflinks 23.789        
cufflinks 7.724       Low
cufflinks 26.089       High

0 Strain