Gene : IQD30 A. thaliana TAIR10
Primary Identifier:  ? AT1G18840 Defline:  (1 of 4) PTHR32295//PTHR32295:SF14 - FAMILY NOT NAMED // PROTEIN IQ-DOMAIN 31-RELATED
Genomic Order:  1896 Name:  ? AT1G18840
Secondary Identifier:  ? PAC:19650917
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18840 0.5kb upstream 0.5kb upstream 4066 true Chr1: 6500848-6504913 Arabidopsis thaliana
AT1G18840 0.5kb upstream 0.5kb upstream 500 false Chr1: 6504414-6504913 Arabidopsis thaliana
AT1G18840 0.5kb downstream 0.5kb downstream 4066 true Chr1: 6500348-6504413 Arabidopsis thaliana
AT1G18840 0.5kb downstream 0.5kb downstream 500 false Chr1: 6500348-6500847 Arabidopsis thaliana
AT1G18840 1.0kb upstream 1.0kb upstream 4566 true Chr1: 6500848-6505413 Arabidopsis thaliana
AT1G18840 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6504414-6505413 Arabidopsis thaliana
AT1G18840 1.0kb downstream 1.0kb downstream 4566 true Chr1: 6499848-6504413 Arabidopsis thaliana
AT1G18840 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6499848-6500847 Arabidopsis thaliana
AT1G18840 2.0kb upstream 2.0kb upstream 5566 true Chr1: 6500848-6506413 Arabidopsis thaliana
AT1G18840 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6504414-6506413 Arabidopsis thaliana
AT1G18840 2.0kb downstream 2.0kb downstream 5566 true Chr1: 6498848-6504413 Arabidopsis thaliana
AT1G18840 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6498848-6500847 Arabidopsis thaliana
AT1G18840 5.0kb upstream 5.0kb upstream 8566 true Chr1: 6500848-6509413 Arabidopsis thaliana
AT1G18840 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6504414-6509413 Arabidopsis thaliana
AT1G18840 5.0kb downstream 5.0kb downstream 8566 true Chr1: 6495848-6504413 Arabidopsis thaliana
AT1G18840 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6495848-6500847 Arabidopsis thaliana
AT1G18840 10.0kb upstream 10.0kb upstream 13566 true Chr1: 6500848-6514413 Arabidopsis thaliana
AT1G18840 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6504414-6514413 Arabidopsis thaliana
AT1G18840 10.0kb downstream 10.0kb downstream 13566 true Chr1: 6490848-6504413 Arabidopsis thaliana
AT1G18840 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6490848-6500847 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041093 5273 Angiosperm View MSA
122361021 5261 Brassicaceae View MSA
123798085 5264 Brassicales-Malvales View MSA
124295763 5266 SBM View MSA
124245105 5268 Malvidae View MSA
124071247 5270 Rosid View MSA
123750451 5271 Pentapetalae View MSA
122791855 5272 Eudicot View MSA
121309793 5274 Embryophyte View MSA
123347451 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.832        
cufflinks 11.994        
cufflinks 4.276        
cufflinks 11.863        
cufflinks 3.767       Low
cufflinks 12.913        

0 Strain