Gene : AT1G18610 A. thaliana TAIR10
Defline:  (1 of 3) PF13415//PF13418 - Galactose oxidase, central domain (Kelch_3) // Galactose oxidase, central domain (Kelch_4) Genomic Order:  1872
Name:  ? AT1G18610 Secondary Identifier:  ? PAC:19651397
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G18610 0.5kb upstream 0.5kb upstream 4153 true Chr1: 6405145-6409297 Arabidopsis thaliana
AT1G18610 0.5kb upstream 0.5kb upstream 500 false Chr1: 6405145-6405644 Arabidopsis thaliana
AT1G18610 0.5kb downstream 0.5kb downstream 4153 true Chr1: 6405645-6409797 Arabidopsis thaliana
AT1G18610 0.5kb downstream 0.5kb downstream 500 false Chr1: 6409298-6409797 Arabidopsis thaliana
AT1G18610 1.0kb upstream 1.0kb upstream 4653 true Chr1: 6404645-6409297 Arabidopsis thaliana
AT1G18610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6404645-6405644 Arabidopsis thaliana
AT1G18610 1.0kb downstream 1.0kb downstream 4653 true Chr1: 6405645-6410297 Arabidopsis thaliana
AT1G18610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6409298-6410297 Arabidopsis thaliana
AT1G18610 2.0kb upstream 2.0kb upstream 5653 true Chr1: 6403645-6409297 Arabidopsis thaliana
AT1G18610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6403645-6405644 Arabidopsis thaliana
AT1G18610 2.0kb downstream 2.0kb downstream 5653 true Chr1: 6405645-6411297 Arabidopsis thaliana
AT1G18610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6409298-6411297 Arabidopsis thaliana
AT1G18610 5.0kb upstream 5.0kb upstream 8653 true Chr1: 6400645-6409297 Arabidopsis thaliana
AT1G18610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6400645-6405644 Arabidopsis thaliana
AT1G18610 5.0kb downstream 5.0kb downstream 8653 true Chr1: 6405645-6414297 Arabidopsis thaliana
AT1G18610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6409298-6414297 Arabidopsis thaliana
AT1G18610 10.0kb upstream 10.0kb upstream 13653 true Chr1: 6395645-6409297 Arabidopsis thaliana
AT1G18610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6395645-6405644 Arabidopsis thaliana
AT1G18610 10.0kb downstream 10.0kb downstream 13653 true Chr1: 6405645-6419297 Arabidopsis thaliana
AT1G18610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6409298-6419297 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378811 5261 Brassicaceae View MSA
123836990 5264 Brassicales-Malvales View MSA
124337504 5266 SBM View MSA
124239908 5268 Malvidae View MSA
124062622 5270 Rosid View MSA
123743479 5271 Pentapetalae View MSA
122792460 5272 Eudicot View MSA
122048338 5273 Angiosperm View MSA
121348105 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.263        
cufflinks 3.361        
cufflinks 2.515        
cufflinks 3.77       High
cufflinks 2.005       Low
cufflinks 2.819        

0 Strain