Gene : NF-YA8 A. thaliana TAIR10
Primary Identifier:  ? AT1G17590 Defline:  (1 of 4) PTHR12632//PTHR12632:SF12 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-3-RELATED
Genomic Order:  1772 Name:  ? AT1G17590
Secondary Identifier:  ? PAC:19652152
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17590 0.5kb upstream 0.5kb upstream 2876 true Chr1: 6050193-6053068 Arabidopsis thaliana
AT1G17590 0.5kb upstream 0.5kb upstream 500 false Chr1: 6052569-6053068 Arabidopsis thaliana
AT1G17590 0.5kb downstream 0.5kb downstream 2876 true Chr1: 6049693-6052568 Arabidopsis thaliana
AT1G17590 0.5kb downstream 0.5kb downstream 500 false Chr1: 6049693-6050192 Arabidopsis thaliana
AT1G17590 1.0kb upstream 1.0kb upstream 3376 true Chr1: 6050193-6053568 Arabidopsis thaliana
AT1G17590 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6052569-6053568 Arabidopsis thaliana
AT1G17590 1.0kb downstream 1.0kb downstream 3376 true Chr1: 6049193-6052568 Arabidopsis thaliana
AT1G17590 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6049193-6050192 Arabidopsis thaliana
AT1G17590 2.0kb upstream 2.0kb upstream 4376 true Chr1: 6050193-6054568 Arabidopsis thaliana
AT1G17590 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6052569-6054568 Arabidopsis thaliana
AT1G17590 2.0kb downstream 2.0kb downstream 4376 true Chr1: 6048193-6052568 Arabidopsis thaliana
AT1G17590 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6048193-6050192 Arabidopsis thaliana
AT1G17590 5.0kb upstream 5.0kb upstream 7376 true Chr1: 6050193-6057568 Arabidopsis thaliana
AT1G17590 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6052569-6057568 Arabidopsis thaliana
AT1G17590 5.0kb downstream 5.0kb downstream 7376 true Chr1: 6045193-6052568 Arabidopsis thaliana
AT1G17590 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6045193-6050192 Arabidopsis thaliana
AT1G17590 10.0kb upstream 10.0kb upstream 12376 true Chr1: 6050193-6062568 Arabidopsis thaliana
AT1G17590 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6052569-6062568 Arabidopsis thaliana
AT1G17590 10.0kb downstream 10.0kb downstream 12376 true Chr1: 6040193-6052568 Arabidopsis thaliana
AT1G17590 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6040193-6050192 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332169 5261 Brassicaceae View MSA
123773269 5264 Brassicales-Malvales View MSA
124271761 5266 SBM View MSA
124127720 5268 Malvidae View MSA
124037989 5270 Rosid View MSA
123747394 5271 Pentapetalae View MSA
122791430 5272 Eudicot View MSA
122049545 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.435        
cufflinks 8.128       High
cufflinks 0.869       Low
cufflinks 9.128       High
cufflinks 1.001        
cufflinks 2.642        

0 Strain