Gene : LEC2 A. thaliana TAIR10
Primary Identifier:  ? AT1G28300 Defline:  (1 of 1) PTHR31140:SF7 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR LEC2
Genomic Order:  2809 Name:  ? AT1G28300
Secondary Identifier:  ? PAC:19657596
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28300 0.5kb upstream 0.5kb upstream 3510 true Chr1: 9896867-9900376 Arabidopsis thaliana
AT1G28300 0.5kb upstream 0.5kb upstream 500 false Chr1: 9899877-9900376 Arabidopsis thaliana
AT1G28300 0.5kb downstream 0.5kb downstream 3510 true Chr1: 9896367-9899876 Arabidopsis thaliana
AT1G28300 0.5kb downstream 0.5kb downstream 500 false Chr1: 9896367-9896866 Arabidopsis thaliana
AT1G28300 1.0kb upstream 1.0kb upstream 4010 true Chr1: 9896867-9900876 Arabidopsis thaliana
AT1G28300 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9899877-9900876 Arabidopsis thaliana
AT1G28300 1.0kb downstream 1.0kb downstream 4010 true Chr1: 9895867-9899876 Arabidopsis thaliana
AT1G28300 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9895867-9896866 Arabidopsis thaliana
AT1G28300 2.0kb upstream 2.0kb upstream 5010 true Chr1: 9896867-9901876 Arabidopsis thaliana
AT1G28300 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9899877-9901876 Arabidopsis thaliana
AT1G28300 2.0kb downstream 2.0kb downstream 5010 true Chr1: 9894867-9899876 Arabidopsis thaliana
AT1G28300 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9894867-9896866 Arabidopsis thaliana
AT1G28300 5.0kb upstream 5.0kb upstream 8010 true Chr1: 9896867-9904876 Arabidopsis thaliana
AT1G28300 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9899877-9904876 Arabidopsis thaliana
AT1G28300 5.0kb downstream 5.0kb downstream 8010 true Chr1: 9891867-9899876 Arabidopsis thaliana
AT1G28300 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9891867-9896866 Arabidopsis thaliana
AT1G28300 10.0kb upstream 10.0kb upstream 13010 true Chr1: 9896867-9909876 Arabidopsis thaliana
AT1G28300 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9899877-9909876 Arabidopsis thaliana
AT1G28300 10.0kb downstream 10.0kb downstream 13010 true Chr1: 9886867-9899876 Arabidopsis thaliana
AT1G28300 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9886867-9896866 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378943 5261 Brassicaceae View MSA
123835869 5264 Brassicales-Malvales View MSA
124344322 5266 SBM View MSA
124240661 5268 Malvidae View MSA
124068672 5270 Rosid View MSA
123744498 5271 Pentapetalae View MSA
122797179 5272 Eudicot View MSA
122050648 5273 Angiosperm View MSA
121351416 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.013     Low High
cufflinks 0.009     Low  
cufflinks 0.006     Low  

0 Strain