Gene : AT1G28050 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31717:SF3 - ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED Genomic Order:  2782
Name:  ? AT1G28050 Secondary Identifier:  ? PAC:19654658
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28050 0.5kb upstream 0.5kb upstream 2783 true Chr1: 9775528-9778310 Arabidopsis thaliana
AT1G28050 0.5kb upstream 0.5kb upstream 500 false Chr1: 9777811-9778310 Arabidopsis thaliana
AT1G28050 0.5kb downstream 0.5kb downstream 2783 true Chr1: 9775028-9777810 Arabidopsis thaliana
AT1G28050 0.5kb downstream 0.5kb downstream 500 false Chr1: 9775028-9775527 Arabidopsis thaliana
AT1G28050 1.0kb upstream 1.0kb upstream 3283 true Chr1: 9775528-9778810 Arabidopsis thaliana
AT1G28050 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9777811-9778810 Arabidopsis thaliana
AT1G28050 1.0kb downstream 1.0kb downstream 3283 true Chr1: 9774528-9777810 Arabidopsis thaliana
AT1G28050 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9774528-9775527 Arabidopsis thaliana
AT1G28050 2.0kb upstream 2.0kb upstream 4283 true Chr1: 9775528-9779810 Arabidopsis thaliana
AT1G28050 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9777811-9779810 Arabidopsis thaliana
AT1G28050 2.0kb downstream 2.0kb downstream 4283 true Chr1: 9773528-9777810 Arabidopsis thaliana
AT1G28050 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9773528-9775527 Arabidopsis thaliana
AT1G28050 5.0kb upstream 5.0kb upstream 7283 true Chr1: 9775528-9782810 Arabidopsis thaliana
AT1G28050 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9777811-9782810 Arabidopsis thaliana
AT1G28050 5.0kb downstream 5.0kb downstream 7283 true Chr1: 9770528-9777810 Arabidopsis thaliana
AT1G28050 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9770528-9775527 Arabidopsis thaliana
AT1G28050 10.0kb upstream 10.0kb upstream 12283 true Chr1: 9775528-9787810 Arabidopsis thaliana
AT1G28050 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9777811-9787810 Arabidopsis thaliana
AT1G28050 10.0kb downstream 10.0kb downstream 12283 true Chr1: 9765528-9777810 Arabidopsis thaliana
AT1G28050 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9765528-9775527 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380235 5261 Brassicaceae View MSA
123827942 5264 Brassicales-Malvales View MSA
124343077 5266 SBM View MSA
124251098 5268 Malvidae View MSA
124074150 5270 Rosid View MSA
123747979 5271 Pentapetalae View MSA
122795064 5272 Eudicot View MSA
122050487 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.088       Low
cufflinks 39.221     High  
cufflinks 37.884     High  
cufflinks 34.584     High  
cufflinks 34.416     High  
cufflinks 31.822     High  

0 Strain