Gene : AT1G28100 A. thaliana TAIR10
Genomic Order:  2787 Name:  ? AT1G28100
Secondary Identifier:  ? PAC:19654047
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28100 0.5kb upstream 0.5kb upstream 3813 true Chr1: 9800582-9804394 Arabidopsis thaliana
AT1G28100 0.5kb upstream 0.5kb upstream 500 false Chr1: 9800582-9801081 Arabidopsis thaliana
AT1G28100 0.5kb downstream 0.5kb downstream 3813 true Chr1: 9801082-9804894 Arabidopsis thaliana
AT1G28100 0.5kb downstream 0.5kb downstream 500 false Chr1: 9804395-9804894 Arabidopsis thaliana
AT1G28100 1.0kb upstream 1.0kb upstream 4313 true Chr1: 9800082-9804394 Arabidopsis thaliana
AT1G28100 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9800082-9801081 Arabidopsis thaliana
AT1G28100 1.0kb downstream 1.0kb downstream 4313 true Chr1: 9801082-9805394 Arabidopsis thaliana
AT1G28100 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9804395-9805394 Arabidopsis thaliana
AT1G28100 2.0kb upstream 2.0kb upstream 5313 true Chr1: 9799082-9804394 Arabidopsis thaliana
AT1G28100 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9799082-9801081 Arabidopsis thaliana
AT1G28100 2.0kb downstream 2.0kb downstream 5313 true Chr1: 9801082-9806394 Arabidopsis thaliana
AT1G28100 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9804395-9806394 Arabidopsis thaliana
AT1G28100 5.0kb upstream 5.0kb upstream 8313 true Chr1: 9796082-9804394 Arabidopsis thaliana
AT1G28100 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9796082-9801081 Arabidopsis thaliana
AT1G28100 5.0kb downstream 5.0kb downstream 8313 true Chr1: 9801082-9809394 Arabidopsis thaliana
AT1G28100 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9804395-9809394 Arabidopsis thaliana
AT1G28100 10.0kb upstream 10.0kb upstream 13313 true Chr1: 9791082-9804394 Arabidopsis thaliana
AT1G28100 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9791082-9801081 Arabidopsis thaliana
AT1G28100 10.0kb downstream 10.0kb downstream 13313 true Chr1: 9801082-9814394 Arabidopsis thaliana
AT1G28100 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9804395-9814394 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373901 5261 Brassicaceae View MSA
123828671 5264 Brassicales-Malvales View MSA
124343668 5266 SBM View MSA
124243672 5268 Malvidae View MSA
124063924 5270 Rosid View MSA
123738444 5271 Pentapetalae View MSA
122785937 5272 Eudicot View MSA
122046936 5273 Angiosperm View MSA
121344536 5274 Embryophyte View MSA
123424938 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.666       Low
cufflinks 3.513       High
cufflinks 1.181        
cufflinks 2.701        
cufflinks 1.27        
cufflinks 1.881        

0 Strain