Gene : AT1G27860 A. thaliana TAIR10
Defline:  (1 of 19) PTHR31260:SF28 - UPF0725 PROTEIN EMB2204 Genomic Order:  2762
Name:  ? AT1G27860 Secondary Identifier:  ? PAC:19656208
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27860 0.5kb upstream 0.5kb upstream 2181 true Chr1: 9704558-9706738 Arabidopsis thaliana
AT1G27860 0.5kb upstream 0.5kb upstream 500 false Chr1: 9706239-9706738 Arabidopsis thaliana
AT1G27860 0.5kb downstream 0.5kb downstream 2181 true Chr1: 9704058-9706238 Arabidopsis thaliana
AT1G27860 0.5kb downstream 0.5kb downstream 500 false Chr1: 9704058-9704557 Arabidopsis thaliana
AT1G27860 1.0kb upstream 1.0kb upstream 2681 true Chr1: 9704558-9707238 Arabidopsis thaliana
AT1G27860 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9706239-9707238 Arabidopsis thaliana
AT1G27860 1.0kb downstream 1.0kb downstream 2681 true Chr1: 9703558-9706238 Arabidopsis thaliana
AT1G27860 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9703558-9704557 Arabidopsis thaliana
AT1G27860 2.0kb upstream 2.0kb upstream 3681 true Chr1: 9704558-9708238 Arabidopsis thaliana
AT1G27860 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9706239-9708238 Arabidopsis thaliana
AT1G27860 2.0kb downstream 2.0kb downstream 3681 true Chr1: 9702558-9706238 Arabidopsis thaliana
AT1G27860 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9702558-9704557 Arabidopsis thaliana
AT1G27860 5.0kb upstream 5.0kb upstream 6681 true Chr1: 9704558-9711238 Arabidopsis thaliana
AT1G27860 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9706239-9711238 Arabidopsis thaliana
AT1G27860 5.0kb downstream 5.0kb downstream 6681 true Chr1: 9699558-9706238 Arabidopsis thaliana
AT1G27860 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9699558-9704557 Arabidopsis thaliana
AT1G27860 10.0kb upstream 10.0kb upstream 11681 true Chr1: 9704558-9716238 Arabidopsis thaliana
AT1G27860 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9706239-9716238 Arabidopsis thaliana
AT1G27860 10.0kb downstream 10.0kb downstream 11681 true Chr1: 9694558-9706238 Arabidopsis thaliana
AT1G27860 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9694558-9704557 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511751 5273 Angiosperm View MSA
122378564 5261 Brassicaceae View MSA
123801912 5264 Brassicales-Malvales View MSA
124299161 5266 SBM View MSA
124150649 5268 Malvidae View MSA
123876230 5270 Rosid View MSA
123459931 5271 Pentapetalae View MSA
122495313 5272 Eudicot View MSA
120784782 5274 Embryophyte View MSA
122826676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.041     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain