Sequence Feature Displayer
Ontology Annotation Displayer
2 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-6351 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-6352 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G27570 0.5kb upstream | 0.5kb | upstream | 7339 | true | Chr1: 9575038-9582376 | Arabidopsis thaliana |
AT1G27570 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 9575038-9575537 | Arabidopsis thaliana |
AT1G27570 0.5kb downstream | 0.5kb | downstream | 7339 | true | Chr1: 9575538-9582876 | Arabidopsis thaliana |
AT1G27570 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 9582377-9582876 | Arabidopsis thaliana |
AT1G27570 1.0kb upstream | 1.0kb | upstream | 7839 | true | Chr1: 9574538-9582376 | Arabidopsis thaliana |
AT1G27570 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 9574538-9575537 | Arabidopsis thaliana |
AT1G27570 1.0kb downstream | 1.0kb | downstream | 7839 | true | Chr1: 9575538-9583376 | Arabidopsis thaliana |
AT1G27570 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 9582377-9583376 | Arabidopsis thaliana |
AT1G27570 2.0kb upstream | 2.0kb | upstream | 8839 | true | Chr1: 9573538-9582376 | Arabidopsis thaliana |
AT1G27570 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 9573538-9575537 | Arabidopsis thaliana |
AT1G27570 2.0kb downstream | 2.0kb | downstream | 8839 | true | Chr1: 9575538-9584376 | Arabidopsis thaliana |
AT1G27570 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 9582377-9584376 | Arabidopsis thaliana |
AT1G27570 5.0kb upstream | 5.0kb | upstream | 11839 | true | Chr1: 9570538-9582376 | Arabidopsis thaliana |
AT1G27570 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 9570538-9575537 | Arabidopsis thaliana |
AT1G27570 5.0kb downstream | 5.0kb | downstream | 11839 | true | Chr1: 9575538-9587376 | Arabidopsis thaliana |
AT1G27570 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 9582377-9587376 | Arabidopsis thaliana |
AT1G27570 10.0kb upstream | 10.0kb | upstream | 16839 | true | Chr1: 9565538-9582376 | Arabidopsis thaliana |
AT1G27570 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 9565538-9575537 | Arabidopsis thaliana |
AT1G27570 10.0kb downstream | 10.0kb | downstream | 16839 | true | Chr1: 9575538-9592376 | Arabidopsis thaliana |
AT1G27570 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 9582377-9592376 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
121493579 | 5273 | Angiosperm | Singleton cluster - no MSA |
122328988 | 5261 | Brassicaceae | Singleton cluster - no MSA |
123770311 | 5264 | Brassicales-Malvales | Singleton cluster - no MSA |
124268853 | 5266 | SBM | Singleton cluster - no MSA |
124125026 | 5268 | Malvidae | Singleton cluster - no MSA |
123854020 | 5270 | Rosid | Singleton cluster - no MSA |
123440053 | 5271 | Pentapetalae | Singleton cluster - no MSA |
122475643 | 5272 | Eudicot | Singleton cluster - no MSA |
120766953 | 5274 | Embryophyte | Singleton cluster - no MSA |
122809351 | 5275 | Viridiplantae | Singleton cluster - no MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |