Gene : AT1G27670 A. thaliana TAIR10
Genomic Order:  2746 Name:  ? AT1G27670
Secondary Identifier:  ? PAC:19656478
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27670 0.5kb upstream 0.5kb upstream 1425 true Chr1: 9627572-9628996 Arabidopsis thaliana
AT1G27670 0.5kb upstream 0.5kb upstream 500 false Chr1: 9628497-9628996 Arabidopsis thaliana
AT1G27670 0.5kb downstream 0.5kb downstream 1425 true Chr1: 9627072-9628496 Arabidopsis thaliana
AT1G27670 0.5kb downstream 0.5kb downstream 500 false Chr1: 9627072-9627571 Arabidopsis thaliana
AT1G27670 1.0kb upstream 1.0kb upstream 1925 true Chr1: 9627572-9629496 Arabidopsis thaliana
AT1G27670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9628497-9629496 Arabidopsis thaliana
AT1G27670 1.0kb downstream 1.0kb downstream 1925 true Chr1: 9626572-9628496 Arabidopsis thaliana
AT1G27670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9626572-9627571 Arabidopsis thaliana
AT1G27670 2.0kb upstream 2.0kb upstream 2925 true Chr1: 9627572-9630496 Arabidopsis thaliana
AT1G27670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9628497-9630496 Arabidopsis thaliana
AT1G27670 2.0kb downstream 2.0kb downstream 2925 true Chr1: 9625572-9628496 Arabidopsis thaliana
AT1G27670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9625572-9627571 Arabidopsis thaliana
AT1G27670 5.0kb upstream 5.0kb upstream 5925 true Chr1: 9627572-9633496 Arabidopsis thaliana
AT1G27670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9628497-9633496 Arabidopsis thaliana
AT1G27670 5.0kb downstream 5.0kb downstream 5925 true Chr1: 9622572-9628496 Arabidopsis thaliana
AT1G27670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9622572-9627571 Arabidopsis thaliana
AT1G27670 10.0kb upstream 10.0kb upstream 10925 true Chr1: 9627572-9638496 Arabidopsis thaliana
AT1G27670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9628497-9638496 Arabidopsis thaliana
AT1G27670 10.0kb downstream 10.0kb downstream 10925 true Chr1: 9617572-9628496 Arabidopsis thaliana
AT1G27670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9617572-9627571 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362080 5261 Brassicaceae View MSA
123840554 5264 Brassicales-Malvales View MSA
124348686 5266 SBM View MSA
124253456 5268 Malvidae View MSA
124051083 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.285       Low
cufflinks 2.077        
cufflinks 0.838        
cufflinks 4.027       High
cufflinks 0.263       Low
cufflinks 1.949        

0 Strain