Gene : AT1G27385 A. thaliana TAIR10
Defline:  (1 of 1) PF04359 - Protein of unknown function (DUF493) (DUF493) Genomic Order:  2714
Name:  ? AT1G27385 Secondary Identifier:  ? PAC:19657974
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27385 0.5kb upstream 0.5kb upstream 2886 true Chr1: 9510475-9513360 Arabidopsis thaliana
AT1G27385 0.5kb upstream 0.5kb upstream 500 false Chr1: 9512861-9513360 Arabidopsis thaliana
AT1G27385 0.5kb downstream 0.5kb downstream 2886 true Chr1: 9509975-9512860 Arabidopsis thaliana
AT1G27385 0.5kb downstream 0.5kb downstream 500 false Chr1: 9509975-9510474 Arabidopsis thaliana
AT1G27385 1.0kb upstream 1.0kb upstream 3386 true Chr1: 9510475-9513860 Arabidopsis thaliana
AT1G27385 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9512861-9513860 Arabidopsis thaliana
AT1G27385 1.0kb downstream 1.0kb downstream 3386 true Chr1: 9509475-9512860 Arabidopsis thaliana
AT1G27385 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9509475-9510474 Arabidopsis thaliana
AT1G27385 2.0kb upstream 2.0kb upstream 4386 true Chr1: 9510475-9514860 Arabidopsis thaliana
AT1G27385 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9512861-9514860 Arabidopsis thaliana
AT1G27385 2.0kb downstream 2.0kb downstream 4386 true Chr1: 9508475-9512860 Arabidopsis thaliana
AT1G27385 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9508475-9510474 Arabidopsis thaliana
AT1G27385 5.0kb upstream 5.0kb upstream 7386 true Chr1: 9510475-9517860 Arabidopsis thaliana
AT1G27385 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9512861-9517860 Arabidopsis thaliana
AT1G27385 5.0kb downstream 5.0kb downstream 7386 true Chr1: 9505475-9512860 Arabidopsis thaliana
AT1G27385 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9505475-9510474 Arabidopsis thaliana
AT1G27385 10.0kb upstream 10.0kb upstream 12386 true Chr1: 9510475-9522860 Arabidopsis thaliana
AT1G27385 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9512861-9522860 Arabidopsis thaliana
AT1G27385 10.0kb downstream 10.0kb downstream 12386 true Chr1: 9500475-9512860 Arabidopsis thaliana
AT1G27385 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9500475-9510474 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329058 5261 Brassicaceae Singleton cluster - no MSA
123836693 5264 Brassicales-Malvales View MSA
124343489 5266 SBM View MSA
124243293 5268 Malvidae View MSA
124062101 5270 Rosid View MSA
123739527 5271 Pentapetalae View MSA
122786727 5272 Eudicot View MSA
122048054 5273 Angiosperm View MSA
121348978 5274 Embryophyte View MSA
123426420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.318        
cufflinks 0.949        
cufflinks 3.534        
cufflinks 1.048        
cufflinks 3.433        
cufflinks 0.933        

0 Strain