Gene : AT1G27200 A. thaliana TAIR10
Defline:  (1 of 7) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  2695
Name:  ? AT1G27200 Secondary Identifier:  ? PAC:19652371
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27200 0.5kb upstream 0.5kb upstream 2702 true Chr1: 9449549-9452250 Arabidopsis thaliana
AT1G27200 0.5kb upstream 0.5kb upstream 500 false Chr1: 9451751-9452250 Arabidopsis thaliana
AT1G27200 0.5kb downstream 0.5kb downstream 2702 true Chr1: 9449049-9451750 Arabidopsis thaliana
AT1G27200 0.5kb downstream 0.5kb downstream 500 false Chr1: 9449049-9449548 Arabidopsis thaliana
AT1G27200 1.0kb upstream 1.0kb upstream 3202 true Chr1: 9449549-9452750 Arabidopsis thaliana
AT1G27200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9451751-9452750 Arabidopsis thaliana
AT1G27200 1.0kb downstream 1.0kb downstream 3202 true Chr1: 9448549-9451750 Arabidopsis thaliana
AT1G27200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9448549-9449548 Arabidopsis thaliana
AT1G27200 2.0kb upstream 2.0kb upstream 4202 true Chr1: 9449549-9453750 Arabidopsis thaliana
AT1G27200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9451751-9453750 Arabidopsis thaliana
AT1G27200 2.0kb downstream 2.0kb downstream 4202 true Chr1: 9447549-9451750 Arabidopsis thaliana
AT1G27200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9447549-9449548 Arabidopsis thaliana
AT1G27200 5.0kb upstream 5.0kb upstream 7202 true Chr1: 9449549-9456750 Arabidopsis thaliana
AT1G27200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9451751-9456750 Arabidopsis thaliana
AT1G27200 5.0kb downstream 5.0kb downstream 7202 true Chr1: 9444549-9451750 Arabidopsis thaliana
AT1G27200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9444549-9449548 Arabidopsis thaliana
AT1G27200 10.0kb upstream 10.0kb upstream 12202 true Chr1: 9449549-9461750 Arabidopsis thaliana
AT1G27200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9451751-9461750 Arabidopsis thaliana
AT1G27200 10.0kb downstream 10.0kb downstream 12202 true Chr1: 9439549-9451750 Arabidopsis thaliana
AT1G27200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9439549-9449548 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374159 5261 Brassicaceae View MSA
123828956 5264 Brassicales-Malvales View MSA
124341209 5266 SBM View MSA
124243155 5268 Malvidae View MSA
124068456 5270 Rosid View MSA
123741891 5271 Pentapetalae View MSA
122797003 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.91       Low
cufflinks 25.709        
cufflinks 26.529     High  
cufflinks 28.037        
cufflinks 37.008     High High
cufflinks 28.55        

0 Strain