Gene : AT1G26800 A. thaliana TAIR10
Defline:  (1 of 3) PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2652
Name:  ? AT1G26800 Secondary Identifier:  ? PAC:19649973
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26800 0.5kb upstream 0.5kb upstream 1726 true Chr1: 9285099-9286824 Arabidopsis thaliana
AT1G26800 0.5kb upstream 0.5kb upstream 500 false Chr1: 9286325-9286824 Arabidopsis thaliana
AT1G26800 0.5kb downstream 0.5kb downstream 1726 true Chr1: 9284599-9286324 Arabidopsis thaliana
AT1G26800 0.5kb downstream 0.5kb downstream 500 false Chr1: 9284599-9285098 Arabidopsis thaliana
AT1G26800 1.0kb upstream 1.0kb upstream 2226 true Chr1: 9285099-9287324 Arabidopsis thaliana
AT1G26800 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9286325-9287324 Arabidopsis thaliana
AT1G26800 1.0kb downstream 1.0kb downstream 2226 true Chr1: 9284099-9286324 Arabidopsis thaliana
AT1G26800 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9284099-9285098 Arabidopsis thaliana
AT1G26800 2.0kb upstream 2.0kb upstream 3226 true Chr1: 9285099-9288324 Arabidopsis thaliana
AT1G26800 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9286325-9288324 Arabidopsis thaliana
AT1G26800 2.0kb downstream 2.0kb downstream 3226 true Chr1: 9283099-9286324 Arabidopsis thaliana
AT1G26800 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9283099-9285098 Arabidopsis thaliana
AT1G26800 5.0kb upstream 5.0kb upstream 6226 true Chr1: 9285099-9291324 Arabidopsis thaliana
AT1G26800 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9286325-9291324 Arabidopsis thaliana
AT1G26800 5.0kb downstream 5.0kb downstream 6226 true Chr1: 9280099-9286324 Arabidopsis thaliana
AT1G26800 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9280099-9285098 Arabidopsis thaliana
AT1G26800 10.0kb upstream 10.0kb upstream 11226 true Chr1: 9285099-9296324 Arabidopsis thaliana
AT1G26800 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9286325-9296324 Arabidopsis thaliana
AT1G26800 10.0kb downstream 10.0kb downstream 11226 true Chr1: 9275099-9286324 Arabidopsis thaliana
AT1G26800 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9275099-9285098 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363890 5261 Brassicaceae View MSA
123837934 5264 Brassicales-Malvales View MSA
124337851 5266 SBM View MSA
124240205 5268 Malvidae View MSA
124061034 5270 Rosid View MSA
123749515 5271 Pentapetalae View MSA
122792844 5272 Eudicot View MSA
122052093 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121312953 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.603        
cufflinks 13.15        
cufflinks 22.194        
cufflinks 23.775        
cufflinks 34.348     High High
cufflinks 11.777       Low

0 Strain