Gene : SP1L1 A. thaliana TAIR10
Primary Identifier:  ? AT1G26355 Defline:  (1 of 3) PTHR33403:SF1 - PROTEIN SPIRAL1
Genomic Order:  2598 Name:  ? AT1G26355
Secondary Identifier:  ? PAC:19655425
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26355 0.5kb upstream 0.5kb upstream 1162 true Chr1: 9117950-9119111 Arabidopsis thaliana
AT1G26355 0.5kb upstream 0.5kb upstream 500 false Chr1: 9118612-9119111 Arabidopsis thaliana
AT1G26355 0.5kb downstream 0.5kb downstream 1162 true Chr1: 9117450-9118611 Arabidopsis thaliana
AT1G26355 0.5kb downstream 0.5kb downstream 500 false Chr1: 9117450-9117949 Arabidopsis thaliana
AT1G26355 1.0kb upstream 1.0kb upstream 1662 true Chr1: 9117950-9119611 Arabidopsis thaliana
AT1G26355 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9118612-9119611 Arabidopsis thaliana
AT1G26355 1.0kb downstream 1.0kb downstream 1662 true Chr1: 9116950-9118611 Arabidopsis thaliana
AT1G26355 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9116950-9117949 Arabidopsis thaliana
AT1G26355 2.0kb upstream 2.0kb upstream 2662 true Chr1: 9117950-9120611 Arabidopsis thaliana
AT1G26355 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9118612-9120611 Arabidopsis thaliana
AT1G26355 2.0kb downstream 2.0kb downstream 2662 true Chr1: 9115950-9118611 Arabidopsis thaliana
AT1G26355 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9115950-9117949 Arabidopsis thaliana
AT1G26355 5.0kb upstream 5.0kb upstream 5662 true Chr1: 9117950-9123611 Arabidopsis thaliana
AT1G26355 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9118612-9123611 Arabidopsis thaliana
AT1G26355 5.0kb downstream 5.0kb downstream 5662 true Chr1: 9112950-9118611 Arabidopsis thaliana
AT1G26355 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9112950-9117949 Arabidopsis thaliana
AT1G26355 10.0kb upstream 10.0kb upstream 10662 true Chr1: 9117950-9128611 Arabidopsis thaliana
AT1G26355 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9118612-9128611 Arabidopsis thaliana
AT1G26355 10.0kb downstream 10.0kb downstream 10662 true Chr1: 9107950-9118611 Arabidopsis thaliana
AT1G26355 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9107950-9117949 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377956 5261 Brassicaceae View MSA
123833538 5264 Brassicales-Malvales View MSA
124345469 5266 SBM View MSA
124239530 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain