Gene : CAL A. thaliana TAIR10
Primary Identifier:  ? AT1G26310 Defline:  (1 of 2) PTHR11945//PTHR11945:SF155 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED
Genomic Order:  2593 Name:  ? AT1G26310
Secondary Identifier:  ? PAC:19650942
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26310 0.5kb upstream 0.5kb upstream 3951 true Chr1: 9100153-9104103 Arabidopsis thaliana
AT1G26310 0.5kb upstream 0.5kb upstream 500 false Chr1: 9103604-9104103 Arabidopsis thaliana
AT1G26310 0.5kb downstream 0.5kb downstream 3951 true Chr1: 9099653-9103603 Arabidopsis thaliana
AT1G26310 0.5kb downstream 0.5kb downstream 500 false Chr1: 9099653-9100152 Arabidopsis thaliana
AT1G26310 1.0kb upstream 1.0kb upstream 4451 true Chr1: 9100153-9104603 Arabidopsis thaliana
AT1G26310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9103604-9104603 Arabidopsis thaliana
AT1G26310 1.0kb downstream 1.0kb downstream 4451 true Chr1: 9099153-9103603 Arabidopsis thaliana
AT1G26310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9099153-9100152 Arabidopsis thaliana
AT1G26310 2.0kb upstream 2.0kb upstream 5451 true Chr1: 9100153-9105603 Arabidopsis thaliana
AT1G26310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9103604-9105603 Arabidopsis thaliana
AT1G26310 2.0kb downstream 2.0kb downstream 5451 true Chr1: 9098153-9103603 Arabidopsis thaliana
AT1G26310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9098153-9100152 Arabidopsis thaliana
AT1G26310 5.0kb upstream 5.0kb upstream 8451 true Chr1: 9100153-9108603 Arabidopsis thaliana
AT1G26310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9103604-9108603 Arabidopsis thaliana
AT1G26310 5.0kb downstream 5.0kb downstream 8451 true Chr1: 9095153-9103603 Arabidopsis thaliana
AT1G26310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9095153-9100152 Arabidopsis thaliana
AT1G26310 10.0kb upstream 10.0kb upstream 13451 true Chr1: 9100153-9113603 Arabidopsis thaliana
AT1G26310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9103604-9113603 Arabidopsis thaliana
AT1G26310 10.0kb downstream 10.0kb downstream 13451 true Chr1: 9090153-9103603 Arabidopsis thaliana
AT1G26310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9090153-9100152 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510733 5273 Angiosperm View MSA
122367571 5261 Brassicaceae View MSA
123799391 5264 Brassicales-Malvales View MSA
124296916 5266 SBM View MSA
124148944 5268 Malvidae View MSA
123874844 5270 Rosid View MSA
123458762 5271 Pentapetalae View MSA
122494160 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.009     Low  
cufflinks 0.017     Low High
cufflinks 0.009     Low  

0 Strain