Gene : AT1G26550 A. thaliana TAIR10
Defline:  (1 of 1) K09579 - peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [EC:5.2.1.8] (PIN4) Genomic Order:  2617
Name:  ? AT1G26550 Secondary Identifier:  ? PAC:19649947
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26550 0.5kb upstream 0.5kb upstream 2311 true Chr1: 9170630-9172940 Arabidopsis thaliana
AT1G26550 0.5kb upstream 0.5kb upstream 500 false Chr1: 9170630-9171129 Arabidopsis thaliana
AT1G26550 0.5kb downstream 0.5kb downstream 2311 true Chr1: 9171130-9173440 Arabidopsis thaliana
AT1G26550 0.5kb downstream 0.5kb downstream 500 false Chr1: 9172941-9173440 Arabidopsis thaliana
AT1G26550 1.0kb upstream 1.0kb upstream 2811 true Chr1: 9170130-9172940 Arabidopsis thaliana
AT1G26550 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9170130-9171129 Arabidopsis thaliana
AT1G26550 1.0kb downstream 1.0kb downstream 2811 true Chr1: 9171130-9173940 Arabidopsis thaliana
AT1G26550 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9172941-9173940 Arabidopsis thaliana
AT1G26550 2.0kb upstream 2.0kb upstream 3811 true Chr1: 9169130-9172940 Arabidopsis thaliana
AT1G26550 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9169130-9171129 Arabidopsis thaliana
AT1G26550 2.0kb downstream 2.0kb downstream 3811 true Chr1: 9171130-9174940 Arabidopsis thaliana
AT1G26550 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9172941-9174940 Arabidopsis thaliana
AT1G26550 5.0kb upstream 5.0kb upstream 6811 true Chr1: 9166130-9172940 Arabidopsis thaliana
AT1G26550 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9166130-9171129 Arabidopsis thaliana
AT1G26550 5.0kb downstream 5.0kb downstream 6811 true Chr1: 9171130-9177940 Arabidopsis thaliana
AT1G26550 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9172941-9177940 Arabidopsis thaliana
AT1G26550 10.0kb upstream 10.0kb upstream 11811 true Chr1: 9161130-9172940 Arabidopsis thaliana
AT1G26550 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9161130-9171129 Arabidopsis thaliana
AT1G26550 10.0kb downstream 10.0kb downstream 11811 true Chr1: 9171130-9182940 Arabidopsis thaliana
AT1G26550 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9172941-9182940 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369833 5261 Brassicaceae View MSA
123829083 5264 Brassicales-Malvales View MSA
124350161 5266 SBM View MSA
124241294 5268 Malvidae View MSA
124050383 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.673     High  
cufflinks 56.503     High  
cufflinks 58.895     High  
cufflinks 54.931     High  
cufflinks 62.472     High High
cufflinks 49.628     High Low

0 Strain