Gene : AT1G25570 A. thaliana TAIR10
Defline:  (1 of 1) PTHR27003//PTHR27003:SF5 - FAMILY NOT NAMED // DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN Genomic Order:  2568
Name:  ? AT1G25570 Secondary Identifier:  ? PAC:19654809
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25570 0.5kb upstream 0.5kb upstream 4171 true Chr1: 8991826-8995996 Arabidopsis thaliana
AT1G25570 0.5kb upstream 0.5kb upstream 500 false Chr1: 8995497-8995996 Arabidopsis thaliana
AT1G25570 0.5kb downstream 0.5kb downstream 4171 true Chr1: 8991326-8995496 Arabidopsis thaliana
AT1G25570 0.5kb downstream 0.5kb downstream 500 false Chr1: 8991326-8991825 Arabidopsis thaliana
AT1G25570 1.0kb upstream 1.0kb upstream 4671 true Chr1: 8991826-8996496 Arabidopsis thaliana
AT1G25570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8995497-8996496 Arabidopsis thaliana
AT1G25570 1.0kb downstream 1.0kb downstream 4671 true Chr1: 8990826-8995496 Arabidopsis thaliana
AT1G25570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8990826-8991825 Arabidopsis thaliana
AT1G25570 2.0kb upstream 2.0kb upstream 5671 true Chr1: 8991826-8997496 Arabidopsis thaliana
AT1G25570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8995497-8997496 Arabidopsis thaliana
AT1G25570 2.0kb downstream 2.0kb downstream 5671 true Chr1: 8989826-8995496 Arabidopsis thaliana
AT1G25570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8989826-8991825 Arabidopsis thaliana
AT1G25570 5.0kb upstream 5.0kb upstream 8671 true Chr1: 8991826-9000496 Arabidopsis thaliana
AT1G25570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8995497-9000496 Arabidopsis thaliana
AT1G25570 5.0kb downstream 5.0kb downstream 8671 true Chr1: 8986826-8995496 Arabidopsis thaliana
AT1G25570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8986826-8991825 Arabidopsis thaliana
AT1G25570 10.0kb upstream 10.0kb upstream 13671 true Chr1: 8991826-9005496 Arabidopsis thaliana
AT1G25570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8995497-9005496 Arabidopsis thaliana
AT1G25570 10.0kb downstream 10.0kb downstream 13671 true Chr1: 8981826-8995496 Arabidopsis thaliana
AT1G25570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8981826-8991825 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372464 5261 Brassicaceae View MSA
123831903 5264 Brassicales-Malvales View MSA
124337957 5266 SBM View MSA
124237833 5268 Malvidae View MSA
124063346 5270 Rosid View MSA
123750625 5271 Pentapetalae View MSA
122787899 5272 Eudicot View MSA
122042080 5273 Angiosperm View MSA
121348136 5274 Embryophyte View MSA
123380739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.084        
cufflinks 22.288        
cufflinks 8.253        
cufflinks 19.114        
cufflinks 7.408       Low
cufflinks 22.254        

0 Strain