Gene : OVA9 A. thaliana TAIR10
Primary Identifier:  ? AT1G25350 Defline:  (1 of 2) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase
Genomic Order:  2543 Name:  ? AT1G25350
Secondary Identifier:  ? PAC:19655198
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25350 0.5kb upstream 0.5kb upstream 5652 true Chr1: 8889110-8894761 Arabidopsis thaliana
AT1G25350 0.5kb upstream 0.5kb upstream 500 false Chr1: 8894262-8894761 Arabidopsis thaliana
AT1G25350 0.5kb downstream 0.5kb downstream 5652 true Chr1: 8888610-8894261 Arabidopsis thaliana
AT1G25350 0.5kb downstream 0.5kb downstream 500 false Chr1: 8888610-8889109 Arabidopsis thaliana
AT1G25350 1.0kb upstream 1.0kb upstream 6152 true Chr1: 8889110-8895261 Arabidopsis thaliana
AT1G25350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8894262-8895261 Arabidopsis thaliana
AT1G25350 1.0kb downstream 1.0kb downstream 6152 true Chr1: 8888110-8894261 Arabidopsis thaliana
AT1G25350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8888110-8889109 Arabidopsis thaliana
AT1G25350 2.0kb upstream 2.0kb upstream 7152 true Chr1: 8889110-8896261 Arabidopsis thaliana
AT1G25350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8894262-8896261 Arabidopsis thaliana
AT1G25350 2.0kb downstream 2.0kb downstream 7152 true Chr1: 8887110-8894261 Arabidopsis thaliana
AT1G25350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8887110-8889109 Arabidopsis thaliana
AT1G25350 5.0kb upstream 5.0kb upstream 10152 true Chr1: 8889110-8899261 Arabidopsis thaliana
AT1G25350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8894262-8899261 Arabidopsis thaliana
AT1G25350 5.0kb downstream 5.0kb downstream 10152 true Chr1: 8884110-8894261 Arabidopsis thaliana
AT1G25350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8884110-8889109 Arabidopsis thaliana
AT1G25350 10.0kb upstream 10.0kb upstream 15152 true Chr1: 8889110-8904261 Arabidopsis thaliana
AT1G25350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8894262-8904261 Arabidopsis thaliana
AT1G25350 10.0kb downstream 10.0kb downstream 15152 true Chr1: 8879110-8894261 Arabidopsis thaliana
AT1G25350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8879110-8889109 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369642 5261 Brassicaceae View MSA
123834323 5264 Brassicales-Malvales View MSA
124337419 5266 SBM View MSA
124240630 5268 Malvidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.337        
cufflinks 8.797        
cufflinks 6.871        
cufflinks 9.815        
cufflinks 6.332       Low
cufflinks 10.279       High

0 Strain