Gene : ASB1 A. thaliana TAIR10
Primary Identifier:  ? AT1G25220 Defline:  (1 of 6) K01658 - anthranilate synthase component II (trpG)
Genomic Order:  2529 Name:  ? AT1G25220
Secondary Identifier:  ? PAC:19653483
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRPSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25220 0.5kb upstream 0.5kb upstream 3215 true Chr1: 8836835-8840049 Arabidopsis thaliana
AT1G25220 0.5kb upstream 0.5kb upstream 500 false Chr1: 8839550-8840049 Arabidopsis thaliana
AT1G25220 0.5kb downstream 0.5kb downstream 3215 true Chr1: 8836335-8839549 Arabidopsis thaliana
AT1G25220 0.5kb downstream 0.5kb downstream 500 false Chr1: 8836335-8836834 Arabidopsis thaliana
AT1G25220 1.0kb upstream 1.0kb upstream 3715 true Chr1: 8836835-8840549 Arabidopsis thaliana
AT1G25220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8839550-8840549 Arabidopsis thaliana
AT1G25220 1.0kb downstream 1.0kb downstream 3715 true Chr1: 8835835-8839549 Arabidopsis thaliana
AT1G25220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8835835-8836834 Arabidopsis thaliana
AT1G25220 2.0kb upstream 2.0kb upstream 4715 true Chr1: 8836835-8841549 Arabidopsis thaliana
AT1G25220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8839550-8841549 Arabidopsis thaliana
AT1G25220 2.0kb downstream 2.0kb downstream 4715 true Chr1: 8834835-8839549 Arabidopsis thaliana
AT1G25220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8834835-8836834 Arabidopsis thaliana
AT1G25220 5.0kb upstream 5.0kb upstream 7715 true Chr1: 8836835-8844549 Arabidopsis thaliana
AT1G25220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8839550-8844549 Arabidopsis thaliana
AT1G25220 5.0kb downstream 5.0kb downstream 7715 true Chr1: 8831835-8839549 Arabidopsis thaliana
AT1G25220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8831835-8836834 Arabidopsis thaliana
AT1G25220 10.0kb upstream 10.0kb upstream 12715 true Chr1: 8836835-8849549 Arabidopsis thaliana
AT1G25220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8839550-8849549 Arabidopsis thaliana
AT1G25220 10.0kb downstream 10.0kb downstream 12715 true Chr1: 8826835-8839549 Arabidopsis thaliana
AT1G25220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8826835-8836834 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378726 5261 Brassicaceae View MSA
123836907 5264 Brassicales-Malvales View MSA
124344711 5266 SBM View MSA
124237098 5268 Malvidae View MSA
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.831       Low
cufflinks 13.721        
cufflinks 9.707       Low
cufflinks 15.438        
cufflinks 11.762        
cufflinks 15.803       High

0 Strain