Gene : AT1G25145 A. thaliana TAIR10
Defline:  (1 of 5) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Genomic Order:  2523
Name:  ? AT1G25145 Secondary Identifier:  ? PAC:19655115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana NAGLIPASYN-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25145 0.5kb upstream 0.5kb upstream 2370 true Chr1: 8818367-8820736 Arabidopsis thaliana
AT1G25145 0.5kb upstream 0.5kb upstream 500 false Chr1: 8818367-8818866 Arabidopsis thaliana
AT1G25145 0.5kb downstream 0.5kb downstream 2370 true Chr1: 8818867-8821236 Arabidopsis thaliana
AT1G25145 0.5kb downstream 0.5kb downstream 500 false Chr1: 8820737-8821236 Arabidopsis thaliana
AT1G25145 1.0kb upstream 1.0kb upstream 2870 true Chr1: 8817867-8820736 Arabidopsis thaliana
AT1G25145 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8817867-8818866 Arabidopsis thaliana
AT1G25145 1.0kb downstream 1.0kb downstream 2870 true Chr1: 8818867-8821736 Arabidopsis thaliana
AT1G25145 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8820737-8821736 Arabidopsis thaliana
AT1G25145 2.0kb upstream 2.0kb upstream 3870 true Chr1: 8816867-8820736 Arabidopsis thaliana
AT1G25145 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8816867-8818866 Arabidopsis thaliana
AT1G25145 2.0kb downstream 2.0kb downstream 3870 true Chr1: 8818867-8822736 Arabidopsis thaliana
AT1G25145 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8820737-8822736 Arabidopsis thaliana
AT1G25145 5.0kb upstream 5.0kb upstream 6870 true Chr1: 8813867-8820736 Arabidopsis thaliana
AT1G25145 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8813867-8818866 Arabidopsis thaliana
AT1G25145 5.0kb downstream 5.0kb downstream 6870 true Chr1: 8818867-8825736 Arabidopsis thaliana
AT1G25145 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8820737-8825736 Arabidopsis thaliana
AT1G25145 10.0kb upstream 10.0kb upstream 11870 true Chr1: 8808867-8820736 Arabidopsis thaliana
AT1G25145 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8808867-8818866 Arabidopsis thaliana
AT1G25145 10.0kb downstream 10.0kb downstream 11870 true Chr1: 8818867-8830736 Arabidopsis thaliana
AT1G25145 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8820737-8830736 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365511 5261 Brassicaceae View MSA
123830520 5264 Brassicales-Malvales View MSA
124344354 5266 SBM View MSA
124241167 5268 Malvidae View MSA
124073632 5270 Rosid View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257     Low  
cufflinks 0.357        
cufflinks 0.324        
cufflinks 0.526       High
cufflinks 0.237     Low Low
cufflinks 0.524       High

0 Strain