Gene : AT1G25240 A. thaliana TAIR10
Defline:  (1 of 4) PTHR22951//PTHR22951:SF19 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2531
Name:  ? AT1G25240 Secondary Identifier:  ? PAC:19654073
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25240 0.5kb upstream 0.5kb upstream 1763 true Chr1: 8844731-8846493 Arabidopsis thaliana
AT1G25240 0.5kb upstream 0.5kb upstream 500 false Chr1: 8844731-8845230 Arabidopsis thaliana
AT1G25240 0.5kb downstream 0.5kb downstream 1763 true Chr1: 8845231-8846993 Arabidopsis thaliana
AT1G25240 0.5kb downstream 0.5kb downstream 500 false Chr1: 8846494-8846993 Arabidopsis thaliana
AT1G25240 1.0kb upstream 1.0kb upstream 2263 true Chr1: 8844231-8846493 Arabidopsis thaliana
AT1G25240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8844231-8845230 Arabidopsis thaliana
AT1G25240 1.0kb downstream 1.0kb downstream 2263 true Chr1: 8845231-8847493 Arabidopsis thaliana
AT1G25240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8846494-8847493 Arabidopsis thaliana
AT1G25240 2.0kb upstream 2.0kb upstream 3263 true Chr1: 8843231-8846493 Arabidopsis thaliana
AT1G25240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8843231-8845230 Arabidopsis thaliana
AT1G25240 2.0kb downstream 2.0kb downstream 3263 true Chr1: 8845231-8848493 Arabidopsis thaliana
AT1G25240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8846494-8848493 Arabidopsis thaliana
AT1G25240 5.0kb upstream 5.0kb upstream 6263 true Chr1: 8840231-8846493 Arabidopsis thaliana
AT1G25240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8840231-8845230 Arabidopsis thaliana
AT1G25240 5.0kb downstream 5.0kb downstream 6263 true Chr1: 8845231-8851493 Arabidopsis thaliana
AT1G25240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8846494-8851493 Arabidopsis thaliana
AT1G25240 10.0kb upstream 10.0kb upstream 11263 true Chr1: 8835231-8846493 Arabidopsis thaliana
AT1G25240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8835231-8845230 Arabidopsis thaliana
AT1G25240 10.0kb downstream 10.0kb downstream 11263 true Chr1: 8845231-8856493 Arabidopsis thaliana
AT1G25240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8846494-8856493 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362890 5261 Brassicaceae View MSA
123841709 5264 Brassicales-Malvales View MSA
124336445 5266 SBM View MSA
124250775 5268 Malvidae View MSA
124065855 5270 Rosid View MSA
123736961 5271 Pentapetalae View MSA
122793040 5272 Eudicot View MSA
122044840 5273 Angiosperm View MSA
121351758 5274 Embryophyte View MSA
123382309 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.238     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.115     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.365        

0 Strain