Gene : IDD16 A. thaliana TAIR10
Primary Identifier:  ? AT1G25250 Defline:  (1 of 1) PTHR10593//PTHR10593:SF43 - SERINE/THREONINE-PROTEIN KINASE RIO // SHOOT GRAVITROPISM5-LIKE PROTEIN
Genomic Order:  2532 Name:  ? AT1G25250
Secondary Identifier:  ? PAC:19656887
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25250 0.5kb upstream 0.5kb upstream 2564 true Chr1: 8849049-8851612 Arabidopsis thaliana
AT1G25250 0.5kb upstream 0.5kb upstream 500 false Chr1: 8849049-8849548 Arabidopsis thaliana
AT1G25250 0.5kb downstream 0.5kb downstream 2564 true Chr1: 8849549-8852112 Arabidopsis thaliana
AT1G25250 0.5kb downstream 0.5kb downstream 500 false Chr1: 8851613-8852112 Arabidopsis thaliana
AT1G25250 1.0kb upstream 1.0kb upstream 3064 true Chr1: 8848549-8851612 Arabidopsis thaliana
AT1G25250 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8848549-8849548 Arabidopsis thaliana
AT1G25250 1.0kb downstream 1.0kb downstream 3064 true Chr1: 8849549-8852612 Arabidopsis thaliana
AT1G25250 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8851613-8852612 Arabidopsis thaliana
AT1G25250 2.0kb upstream 2.0kb upstream 4064 true Chr1: 8847549-8851612 Arabidopsis thaliana
AT1G25250 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8847549-8849548 Arabidopsis thaliana
AT1G25250 2.0kb downstream 2.0kb downstream 4064 true Chr1: 8849549-8853612 Arabidopsis thaliana
AT1G25250 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8851613-8853612 Arabidopsis thaliana
AT1G25250 5.0kb upstream 5.0kb upstream 7064 true Chr1: 8844549-8851612 Arabidopsis thaliana
AT1G25250 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8844549-8849548 Arabidopsis thaliana
AT1G25250 5.0kb downstream 5.0kb downstream 7064 true Chr1: 8849549-8856612 Arabidopsis thaliana
AT1G25250 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8851613-8856612 Arabidopsis thaliana
AT1G25250 10.0kb upstream 10.0kb upstream 12064 true Chr1: 8839549-8851612 Arabidopsis thaliana
AT1G25250 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8839549-8849548 Arabidopsis thaliana
AT1G25250 10.0kb downstream 10.0kb downstream 12064 true Chr1: 8849549-8861612 Arabidopsis thaliana
AT1G25250 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8851613-8861612 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372998 5261 Brassicaceae View MSA
123800480 5264 Brassicales-Malvales View MSA
124297892 5266 SBM View MSA
124149670 5268 Malvidae View MSA
124069304 5270 Rosid View MSA
123753156 5271 Pentapetalae View MSA
122787827 5272 Eudicot View MSA
122044064 5273 Angiosperm View MSA
121351060 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.544        
cufflinks 0.933       Low
cufflinks 1.92       High
cufflinks 1.124        
cufflinks 1.532        
cufflinks 1.554        

0 Strain